Pairwise Alignments

Query, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  252 bits (644), Expect = 4e-71
 Identities = 173/524 (33%), Positives = 275/524 (52%), Gaps = 20/524 (3%)

Query: 192 WWVCPRTSGKVCVVEPYFYDIDGQQVLMTSIVFPLAVNGKIIATLSIDINLNSLQALSQE 251
           W+   + +GK    EPY       Q L+ ++  P+   G++I   + ++   +L  L ++
Sbjct: 135 WYKEAKAAGKPITTEPYVSVT--MQTLVVTLAEPVRYQGQLIGVAASNL---ALDKLIKD 189

Query: 252 ASRSLYEGRTTVGILTPVGLLAGYSADASKLAQRFDQVDPTKGAELVRKLADGKLTTLHD 311
                  G+    ++   G +  +      L    +       ++L     D  L  L  
Sbjct: 190 VLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSM 249

Query: 312 RQRLKVLAAFRPIPDAQPWGVLLDVPENALTGPAETLKQELDALNTSGTLLELSLGLAAA 371
             R KVL A   + +   W +++ + +  L  P   +            ++++ +GL   
Sbjct: 250 DGRDKVLMA-EEVANTD-WLLVMVMDKGVLEQPLNDM-----------LMVQIGIGLGIL 296

Query: 372 IV-GLLLVWLMARGVTRPILGVAAMLKDIASGEGDLTRRLTYQKQDELGELAGWFNRFLD 430
           +V  LL  W +AR +   +  +A  L DIA G+GDLTRRL  + QDE+G LA  FN+F+D
Sbjct: 297 LVMALLTSWFVARQLNE-LGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVD 355

Query: 431 KLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQYRQVDQVATASHEMSATAQDVAR 490
           +L   +  V+    A    AD ++A AT+ S  +  Q  ++  VATA  EM++   ++A 
Sbjct: 356 RLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIAS 415

Query: 491 SAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMSDTMAEIEGLAQNSEKIGSVLEV 550
           +A   A+ A  + Q   +G A + ++  SI  LA  ++  +  I  L  ++ +I ++L  
Sbjct: 416 NAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILST 475

Query: 551 IRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEETRQVIEALQNG 610
           IR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L+QRT  S EE +  I  LQ  
Sbjct: 476 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKV 535

Query: 611 TREVVGAMDHSHRQAQGGVEQVGQAVTALQRIGQAVTVITDMNLQIASAAEEQSAVAEEI 670
           T   V  M  SH+  +  V  V Q   +LQ I +A+  I+DM  QIASAAEEQS V  +I
Sbjct: 536 TTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADI 595

Query: 671 NSNVATIRDVTESLSGQANESARVSQSLNSLANQQQALMDQFRV 714
           N N  ++R+V++ L+ +A +S + ++SL+++A +    + +F++
Sbjct: 596 NVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639