Pairwise Alignments

Query, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 624 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  273 bits (698), Expect = 2e-77
 Identities = 190/557 (34%), Positives = 296/557 (53%), Gaps = 49/557 (8%)

Query: 174 EHDMANTEIGPSGQPANTW-------WVCPRTSGKVCVVEPYFYDIDGQQVLMTSIVFPL 226
           E D +N    PS  P  TW       +   + +GK+ +  PY     G+  ++ S+  P+
Sbjct: 101 EKDGSNINNDPSWNPGPTWDPRVRPWYKDAKNAGKLVITAPYADSASGE--ILVSVATPV 158

Query: 227 --AVNGKIIATLSIDINLNSLQALSQEASRSLYEGRTTVGILTPVGLLAGYSADASKLAQ 284
             +  G+ + ++  D++L  L  L  E              L   G +   S D + +A 
Sbjct: 159 KDSATGQFLGSIFYDVSLAELAELVNEVK------------LFDAGYVFIVSEDGTTIAH 206

Query: 285 RFDQVDPTKGAELVRKLADGKLTTLHDRQRL----KVLAAFRPIPDAQPW--GVLLDVPE 338
              + +   G  +   L + K+    D  ++    K  A      + + W  GV++D   
Sbjct: 207 PKKEFN---GKPMSEFLGESKINV--DTHQVIINGKPYAVSFSDVEGEDWYVGVVID--- 258

Query: 339 NALTGPAETLKQELDALNTSGTLLELSLGLAAAIVGLLLVWLMARGVTRPILGVAAMLKD 398
                  E     LD L  S     L   + A ++ + ++  + R + +P+  +   +++
Sbjct: 259 ------EEIAYAALDELRRS----TLIFTVIALVISVFVLLFIVRVLMKPLDTLNDAIQN 308

Query: 399 IASGEGDLTRRLTYQKQDELGELAGWFNRFLDKLQPTIAEVKR-SVQAARGTADQSSAIA 457
           +ASGEGDLT+RL+    +E  +LA  FN F + LQ  + + K    +  RG+ + +S   
Sbjct: 309 VASGEGDLTQRLSTNTDEEFAKLAIGFNTFTETLQKQLIQSKAIGAEILRGS-ESTSMTL 367

Query: 458 TETSAGMEQQYRQVDQVATASHEMSATAQDVARSAAQAAQAARDADQATREGLAVIDRTT 517
            +++  M  Q  +++Q+ATA HEM+ T+ DVA +A  AA AA+ AD A   G  V+ +TT
Sbjct: 368 QQSAEAMRSQLHELEQLATAMHEMATTSSDVANNAQGAASAAKVADDAAAAGTDVVTKTT 427

Query: 518 SSIGALAANMSDTMAEIEGLAQNSEKIGSVLEVIRSIAEQTNLLALNAAIEAARAGEAGR 577
            +I  L+A +   + +++ L   +  I +VL+VI  IA+QTNLLALNAAIEAARAGE+GR
Sbjct: 428 KAIDTLSATIDAAVDDVKVLESATANIETVLKVINDIADQTNLLALNAAIEAARAGESGR 487

Query: 578 GFAVVADEVRNLAQRTQESVEETRQVIEALQNGTREVVGAMDHSHRQAQGGVEQVGQAVT 637
           GFAVVADEVR LAQRTQ+S  E R +IE LQ+G   V  AM HS   A   V Q   A  
Sbjct: 488 GFAVVADEVRTLAQRTQQSTTEIRNMIEKLQSGANAVAVAMSHSKDTAASAVNQAQGANE 547

Query: 638 ALQRIGQAVTVITDMNLQIASAAEEQSAVAEEINSNVATIRDVTESLSGQANESARVSQS 697
           AL++I  A+  I+DMN+QIASAAEEQS VAEEIN+N   I+D+++ ++  A+E+    Q 
Sbjct: 548 ALEKIRLAIQQISDMNIQIASAAEEQSLVAEEINNNTVKIKDLSDQVAESADEANMSMQI 607

Query: 698 LNSLANQQQALMDQFRV 714
                 +Q A++++F+V
Sbjct: 608 QTENIREQDAILNKFKV 624