Pairwise Alignments

Query, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 706 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  422 bits (1086), Expect = e-122
 Identities = 259/714 (36%), Positives = 387/714 (54%), Gaps = 11/714 (1%)

Query: 3   LRQLSIQWKITLLAGLCLAAIVTLLVGLSLYRMDHSSDLVKASSMQMLTEAAQSRIESQG 62
           +RQ+S+QWKITLLAGLCL      L+G S+Y    S    K  S + + + +Q  +++  
Sbjct: 1   MRQISVQWKITLLAGLCLVFTSLALIGFSIYNARASQQTAKLQSSESVIDKSQQLLQTGA 60

Query: 63  EVQALNIRRQFMDAYQYGAGFARQVLFLREQAEKRFLDAFDLREDMTRQVRAALQANPDL 122
            + A  I     +A       A   LFL+  +E+ F ++  LR  +   VR ++     +
Sbjct: 61  LLNATEISEYLSEAIYRAEMLAANALFLKNNSEENFGESEVLRTSLDEMVRKSVLGFDTI 120

Query: 123 LGLSLVFEPNALDNKDSLFAGKAELGSNETGRFALYWSQPRAGQ-LTSMALPEHDMANTE 181
            G  LVF PN LD++DS +     +GSN+ G+FA YW++   GQ + S  L +  +    
Sbjct: 121 EGAYLVFRPNMLDSEDSNYVNADYVGSNDIGQFAAYWTKAANGQNVISRVLTQAQLTE-- 178

Query: 182 IGPSGQPANTWWVCPRTSGKVCVVEPYFYDIDGQQVLMTSIVFPLAVNGKIIATLSIDIN 241
                +     +VCP      C+  P   + +  + L TS+  P+ ++G  I    ID+ 
Sbjct: 179 -----ESNKERFVCPIEQASPCITSPRMVEFETGRYLATSLSVPILIDGVAIGFYGIDLT 233

Query: 242 LNSLQALSQEASRSLYEGRTTVGILTPVGLLAGYSADASKLAQRFDQVDPTKGAELVRKL 301
           L  L  ++Q++  +L++G+  V I++    L    A    L + F Q +    + +   L
Sbjct: 234 LAPLIGITQKSDNNLFDGQGKVSIVSENNALVASDAAFLTLGETF-QSENLSRSTVSSLL 292

Query: 302 ADGKLTTLHDRQRLKVLAAFRPIPDA-QPWGVLLDVPENALTGPAETLKQELDALNTSGT 360
             G++ T       + L  F PI  A Q WG++ ++P  ++   AE L   L      G 
Sbjct: 293 QAGQVNTQWSEDG-QWLVVFAPIKVANQNWGIIFEMPRQSVMQDAEQLDILLTEQLERGI 351

Query: 361 LLELSLGLAAAIVGLLLVWLMARGVTRPILGVAAMLKDIASGEGDLTRRLTYQKQDELGE 420
             EL +G    +VGLL+V LMA  + RPI  VA  L+DI+SGEGDLT+RL     DE+G+
Sbjct: 352 RSELMVGTLMVVVGLLVVTLMAMRLVRPIRAVAERLQDISSGEGDLTQRLQVNSADEIGQ 411

Query: 421 LAGWFNRFLDKLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQYRQVDQVATASHE 480
           LA  FN F+DKLQP I  V  +      T +Q  +    T    E Q+++VD VATA+ E
Sbjct: 412 LAQGFNLFMDKLQPIIRRVVDNTGQVVSTTEQVKSTVESTRRSSEAQFKEVDSVATAAEE 471

Query: 481 MSATAQDVARSAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMSDTMAEIEGLAQN 540
           M+ T+  V  +A +A  AA DA +A + G  VI  +   +  L   M+  +  +E LA+N
Sbjct: 472 MTQTSAHVVENAQRAVNAASDAQRAAQTGDEVIRHSQMQMNQLVDRMNLAVPVVEELARN 531

Query: 541 SEKIGSVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQESVEET 600
           +  I  +L VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ SV E 
Sbjct: 532 NTGIIEILSVIEGISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQASVGEI 591

Query: 601 RQVIEALQNGTREVVGAMDHSHRQAQGGVEQVGQAVTALQRIGQAVTVITDMNLQIASAA 660
           R VI  ++ GT++VV A+  S+  AQ   EQV  AVT L R+  A+  I +M+ QI  AA
Sbjct: 592 RSVINKVELGTQDVVKAIQGSNETAQATAEQVADAVTQLNRVFSAIHAINEMSHQIVQAA 651

Query: 661 EEQSAVAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQALMDQFRV 714
           ++Q  V+ ++  +V  IRD++  +  +   S +V + +  L+ +QQ L+ QF+V
Sbjct: 652 QDQQTVSAQVTQSVVNIRDLSAQILSETEASEKVGEQIARLSFEQQTLVGQFKV 705