Pairwise Alignments

Query, 714 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

Subject, 706 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  294 bits (752), Expect = 1e-83
 Identities = 202/717 (28%), Positives = 351/717 (48%), Gaps = 18/717 (2%)

Query: 3   LRQLSIQWKITLLAGLCLAAIVTLLVGLSLYRMDHSSDLVKASSMQMLTEAAQSRIESQG 62
           ++ LSI  K+  +      +IV +L     + +   +  +     + L      ++E++ 
Sbjct: 1   MKHLSISTKLLWITSALFLSIVAILSISLWWTLSEQNVELSHQVQETLQIETHDKLEARA 60

Query: 63  EVQALNIRRQFMDAYQYGAGFARQVLFLREQAEKRFLDAFDLREDMTRQVRAALQANPDL 122
                 +     +AY+    FA  V    E+   +       R+ +   + A L+ N  +
Sbjct: 61  GEYGEMVAGFINEAYRIPYSFAGIVESTAEELPLK-------RDRLELAIAAVLKKNTQI 113

Query: 123 LGLSLVFEPNALDNKDSLFAG-KAELGSNETGRFALYWSQPRAGQLTSMALPEH-DMANT 180
             +   FE N  D  DS F           +G   +Y+++   G +    + +  +   T
Sbjct: 114 SSMYAQFEANGYDGLDSEFLNVNVSHSVASSGVLEIYYTRNDDGTVEHHQVEDSSEKYKT 173

Query: 181 EIGPSGQPANTWWVCPRTSGKVCVVEPYFYDID-GQQVLMTSIVFPLAVNGKIIATLSID 239
            +   G   + W++C + + K C++EPY Y+I  G   LMTS+      + + I  + +D
Sbjct: 174 SLNEFGIRESEWYLCAKETLKPCLMEPYLYEITPGNTALMTSLTVSAVKHKQFIGVVGVD 233

Query: 240 INLNSLQALSQEASRSLYEGRTTVGILTPVGLLAGYSADASKLAQRFDQVDPTKGAELVR 299
           +NL   Q L  + S+SLY+G+  V +L+  GL+   S  + K     + +DP    +++ 
Sbjct: 234 VNLPVFQVLIDKLSKSLYDGQAKVTLLSTRGLVVAASHYSKKARPLAESIDPKLAVQMIA 293

Query: 300 KLADGKLTTLHDRQRLKVLAAFR---PIPDAQPWGVLLDVPENALTGPAETLKQELDALN 356
              +G      D    +++ A+    P+ +A+ W + + VP++     +  L +++D + 
Sbjct: 294 LHKNGGYMANDD----EIIVAYPIDIPLANAE-WSLAIQVPKSMALKSSILLNEKMDDMA 348

Query: 357 TSGTLLELSLGLAAAIVGLLLVWLMARGVTRPILGVAAMLKDIASGEGDLTRRLTYQKQD 416
           TS   + + +GLA +I+ ++ + ++ R V  P+  +   ++++AS +GDLT+ +      
Sbjct: 349 TSLGSILVIVGLAVSILAVVTISIVIRSVIAPLRLIQGRVENLASADGDLTQSIEVDSHA 408

Query: 417 ELGELAGWFNRFLDKLQPTIAEVKRSVQAARGTADQSSAIATETSAGMEQQYRQVDQVAT 476
           EL  L   FN F+ KL+  I+E+K      +  +  S+ IA  T   + +QY +++ V T
Sbjct: 409 ELIALGKGFNSFIHKLKDLISELKALAGQTQEESLSSAKIAELTRDSVHRQYGEIESVVT 468

Query: 477 ASHEMSATAQDVARSAAQAAQAARDADQATREGLAVIDRTTSSIGALAANMSDTMAEIEG 536
           A +EMSATA +VA+++ Q A       +        + +    +  ++         +  
Sbjct: 469 AVNEMSATALEVAKASEQTAAETEAMSRNVHLSEESLTKAMDYVTTMSQESMQAKVAVSK 528

Query: 537 LAQNSEKIGSVLEVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQES 596
           +A++S  I  +LEVI SIA QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TQ S
Sbjct: 529 VAESSTNISRILEVISSIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTQSS 588

Query: 597 VEETRQVIEALQNGTREVVGAMDHSHRQAQGGVEQVGQAVTALQRIGQAVTVITDMNLQI 656
            ++   +I+ALQ   +     +D    +AQ  V Q  QA+T+L  +   +  I+     I
Sbjct: 589 TDDISVLIDALQKEVQSASAIIDKGAERAQMAVSQTEQALTSLNSMVSQIEEISAQVTHI 648

Query: 657 ASAAEEQSAVAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQALMDQFR 713
           A+AAEEQSAV EE+N N+  I D    L+  A E+ + S  L  L  QQ   + + +
Sbjct: 649 AAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVVLAELVKQQHQQLGKLK 705