Pairwise Alignments

Query, 589 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 596 a.a., Acyl-CoA dehydrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  589 bits (1518), Expect = e-172
 Identities = 308/591 (52%), Positives = 401/591 (67%), Gaps = 13/591 (2%)

Query: 1   MTTYSAPLRDMRFVLHDVFNASGLWARLPALAERIDADTADAILEEASKVTGQLIAPLSR 60
           M  Y APLRDMR+VL+D+F+ + L   LP   E   AD  D +LEEA+K+   ++ PL+R
Sbjct: 1   MAGYKAPLRDMRYVLYDLFDGASL-TTLPGY-EEFTADLIDPVLEEAAKICEDVLQPLNR 58

Query: 61  NGDEQGVCFDAGQVTTPEGFREAWNTYREGGWVGLGGNPEYGGMGMPKMLGVLFEEMLYA 120
            GDE+G   + G V TP+GF EA+ T+REGGW  +  +P +GG G+P+++    EEM+ A
Sbjct: 59  PGDEEGCVLENGVVRTPKGFPEAYRTFREGGWTSITCDPAHGGQGLPQVVNTFIEEMICA 118

Query: 121 ADCSFSLYSALSAGSCLAIDAHASEALKATYLPPLYEGRWAGTMCLTEPHAGTDLGLIRT 180
           A+ SF +Y  LS G+ +A+    +E  KA YLP L +G W GTMCLTEP  GTDLGL+RT
Sbjct: 119 ANLSFGMYPGLSHGAYVALKQFGTEDQKARYLPALVDGTWTGTMCLTEPQCGTDLGLLRT 178

Query: 181 RAEPQADGSVRISGSKIFITGGEQDLTENIVHLVLAKMPDAPAGAKGISLFLVPKFLVEA 240
           +A P  +G  +I+G+KIFI+ G+ DLTENI+HLVLA++PDAP G KGISLFLVPK LV  
Sbjct: 179 KAVPDGEGGYKITGTKIFISAGDHDLTENILHLVLARLPDAPKGIKGISLFLVPKVLVTE 238

Query: 241 DGRLGARNAVHCGSIEHKMGIKASATCVMNFDGAIGYLVGEPNKGLTAMFTMMNYERLSI 300
           +G LG RNAV CG++EHKMGIKAS+TCV+NFD A G+L+GEP+KG+ AMF MMN  RL +
Sbjct: 239 EGALGDRNAVTCGALEHKMGIKASSTCVLNFDEATGWLIGEPHKGMRAMFAMMNTARLGV 298

Query: 301 GIQGIGCAEASYQSAARYANERLQSRAATGPQAHDKAADPIIHHGDVRRMLLTMRTLTEA 360
           G+QG+G AEASYQ A  YA +RLQ R+ +G +A DK ADP+I H DVRRMLLT R + E 
Sbjct: 299 GVQGLGLAEASYQGAVAYARDRLQGRSPSGVKAPDKPADPLIVHPDVRRMLLTQRAIVEG 358

Query: 361 GRAFAVYVGQQLDVARYAEDAGEREHAQRLVALLTPVAKAFFTDNGLESCVLGQQVYGGH 420
           GRA A +VG  LD   +A D   R  A   VAL+TPV KA  TD G E+  LG QV+GGH
Sbjct: 359 GRALAAWVGLALDRQHHAGDPATRAEAGEFVALMTPVVKALLTDLGSEATNLGVQVFGGH 418

Query: 421 GYIREWGQEQRVRDVRIAQIYEGTNGIQALDLLGRKVLADGGQALASFASEVRAFSVDAP 480
           GYIRE G EQ +RD RI QIYEGTNGIQALDL+GRK+  + G+ L  F   V  + ++A 
Sbjct: 419 GYIREHGMEQYIRDCRITQIYEGTNGIQALDLVGRKLPENAGRNLRRFFHPVADY-IEAR 477

Query: 481 LHREALQASLARLEATSSWLRAQAGEDANL-------VSAVAVEYLQLFGLTAYAYMWAR 533
           L  + L   +  L  T   L+    + A +        +A A +Y +L G TA AY+WAR
Sbjct: 478 LDDDTLAEFVGPLAKTFVRLQQATAQVARVGMTKPAEAAAAATDYQRLLGFTALAYLWAR 537

Query: 534 MAAVALAK---RDEDDAFHGAKLACAAFYFQRVLPRGLGLEASIRAGSGSL 581
           MA ++L K    +++DAFH AK+A A  + +R+LP+  GL A+I AG  SL
Sbjct: 538 MAELSLPKAGTAEDNDAFHSAKVATARVFMERLLPQTSGLFATIMAGGRSL 588