Pairwise Alignments

Query, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

Subject, 560 a.a., long-chain fatty acid--CoA ligase from Pseudomonas fluorescens FW300-N2C3

 Score =  265 bits (676), Expect = 4e-75
 Identities = 175/518 (33%), Positives = 275/518 (53%), Gaps = 31/518 (5%)

Query: 37  VIHGAIRRNWQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLN 96
           V    +R ++    +R  RLA+ L   G+  GDTVAVM  ++   LE  F +PM GAV++
Sbjct: 37  VYRDQLRYSYPTLIERVARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGAVIH 96

Query: 97  TLNVRLDAEAIAFMLQHGEAKVLITDREF---HAVIEGALALLEHPPLVVDVDDPEYGEG 153
           T+NVRL  E I + + H E + ++ + EF   +  I G L  ++   L+ D+ +      
Sbjct: 97  TINVRLSPEQIVYTMNHAEDRFVLVNSEFVGLYQAIAGHLTTVDKTLLLTDLPEKTADLP 156

Query: 154 RAVSQLDYEALLNEGDPEFAWEWPD-DEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALG 212
             V +  YE LL    P  A+++ D DE    +  YT+GTTGNPKGV + HR   L+ +G
Sbjct: 157 NLVGE--YEQLLAAAAP--AYDFQDFDENSVATTFYTTGTTGNPKGVYFTHRQLVLHTMG 212

Query: 213 NQMTWA-------MGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLI 265
                        +G   VY+   PMFH + W  P+  T L    V+  R DP+ ++ L 
Sbjct: 213 VATIMGAIDSVRLLGTNDVYMPITPMFHVHAWGLPYVATMLGLKQVYPGRYDPEFLVQLW 272

Query: 266 REHKVSHLCGAPIVLNALVNMPEAAKAAIEHPV---QAMVAGAAPPAKVIGAVEQMGIKV 322
           R+  V+     P +L  ++N    AK A +      + ++ G+A    +  A +  GI++
Sbjct: 273 RKENVTFSHCVPTILQMVLN----AKGAQDTDFGGWKIVIGGSALNRSLYEAAKARGIQL 328

Query: 323 THTYGLTEVYGPVTVCAW-HDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVP 381
           T  YG++E  GP+  CA  +DE  A S +ER   + + GV  P ++  +V        +P
Sbjct: 329 TAAYGMSET-GPLVSCAHLNDELMAGSEDERTTYRIKAGVPGPLVEAAIVDTEGRF--LP 385

Query: 382 RDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWFHTGDLAVWHADGYIEIKDRLKDII 441
            DG+T GE+ +R   + +GY   P+  AE + GGW HTGD+A     G+I+I+DR+KD+I
Sbjct: 386 ADGETQGELVLRAPWLTEGYFNEPQKGAELWAGGWLHTGDVATLDNMGFIDIRDRIKDVI 445

Query: 442 ISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWGETPCAFVALKPGRE----DTREAD 497
            +GGE IS++++ED + +H AV E AVV  PD +WGE P A + ++ G E    + +E  
Sbjct: 446 KTGGEWISSLDLEDLISRHVAVREVAVVGIPDPQWGERPFALLVVREGHEIGARELKEHL 505

Query: 498 ITSWCREHLAGFKVPKTV-VFGELPKTSTGKIQKYVLR 534
                  HL+ + +P  + +  E+PKTS GK+ K  +R
Sbjct: 506 KPFVELGHLSKWAIPSQIALVTEIPKTSVGKLDKKRIR 543