Pairwise Alignments

Query, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

Subject, 542 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  691 bits (1784), Expect = 0.0
 Identities = 333/539 (61%), Positives = 405/539 (75%), Gaps = 2/539 (0%)

Query: 2   SIYAQGLMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALA 61
           S Y+ GL     NHV LTPL+F++R A V+ + P+++HG  R  W ET QR RRLASAL 
Sbjct: 3   SPYSTGLDRTPANHVPLTPLAFLDRAAQVFPDRPSLVHGKRRYTWAETAQRARRLASALR 62

Query: 62  GRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLIT 121
            RGIG  DTVAVM  NTP + EAHFGVPM GAVLN LNVRL+AE IAF+L+HGEA+VL+T
Sbjct: 63  ARGIGPEDTVAVMGANTPELYEAHFGVPMAGAVLNALNVRLNAEEIAFILEHGEARVLLT 122

Query: 122 DREFHAVIEGALALLEHPPLVVDVDDPEY-GEGRAVSQLDYEALLNEGDPEFAWEWPDDE 180
           D EF  +I  ALA ++ P  V+D+ DPEY G G  V +++YEA L EGDP   W WP DE
Sbjct: 123 DTEFSPIIADALARIDRPITVIDIVDPEYDGPGACVGEMEYEAFLAEGDPTADWRWPADE 182

Query: 181 WQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCNGWCYP 240
           W++I+LNYTSGTTGNPKGVVYHHRGAYLNAL N +TW M H  VYLWTLPMFHCNGWC+P
Sbjct: 183 WESITLNYTSGTTGNPKGVVYHHRGAYLNALSNIITWGMPHHAVYLWTLPMFHCNGWCFP 242

Query: 241 WTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQA 300
           WT+ A AGT+V LRRV    I   I E KVSH CGAPIVL+ L+N     + + +H V  
Sbjct: 243 WTMAANAGTNVCLRRVTAAGIFQAIAEEKVSHFCGAPIVLSFLINARPEERRSFDHQVNV 302

Query: 301 MVAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARIKSRQG 360
           M A A PPA V+  +++ G  VTH YGLTE YGP TVCAW + W+ L ++E+AR+KSRQG
Sbjct: 303 MTAAAPPPASVLEKMQREGFCVTHVYGLTETYGPATVCAWKEPWNDLPMDEQARLKSRQG 362

Query: 361 VRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWFHTG 420
           VRY   +GLMV DP+T++ VP DG+++GE+F RGN  MKGYLKNPEATAEAFRGGWFHTG
Sbjct: 363 VRYLVQEGLMVGDPETMEAVPADGESMGEVFFRGNITMKGYLKNPEATAEAFRGGWFHTG 422

Query: 421 DLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWGETP 480
           DL V H DGY+++KDR KDIIISGGENIS+IEVE  L++H  V+ AAVVA+PDEKWGETP
Sbjct: 423 DLGVLHPDGYLQLKDRSKDIIISGGENISSIEVEGVLHRHPDVVAAAVVAKPDEKWGETP 482

Query: 481 CAFVALKPGREDTREADITSWCREHLAGFKVPKTVVFGELPKTSTGKIQKYVLRDRAKA 539
            A+V L+ G   T E ++ ++CR HLA +K P+ V  G LPKTSTGKIQK+VLR + +A
Sbjct: 483 KAYVELRDGATVT-EDELVAFCRLHLAHYKCPRDVEVGPLPKTSTGKIQKFVLRRQVRA 540