Pairwise Alignments

Query, 468 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  173 bits (438), Expect = 3e-47
 Identities = 125/375 (33%), Positives = 199/375 (53%), Gaps = 25/375 (6%)

Query: 98   EERHGAREANRAR-RLYRLIIENTTDLISRHSPDGRFLDASPAAYRLLGLWPEQLRGMPV 156
            EE   A+EA R R R    ++E    +I   +P+G  +  S      LG   E+L G   
Sbjct: 849  EEEMRAQEALRERERFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELEELDGGAK 908

Query: 157  HTL-------LHPRERRQVLRQAAAALDQDGYHTMTCRVRQATGGYRWFEIASRAIRETY 209
              L       +HP +   V  Q A +L+    +    R+R+  G YRW E  +  +R+  
Sbjct: 909  SRLDATLDAGVHPDDLAGVKEQYARSLESGEPYRRKHRLRRFDGEYRWIETRAAPMRDE- 967

Query: 210  TGAVVE----VVSVSRDITLRIE---AQESLAHSARLATLGELASGIAHEINQPLAAVVN 262
             GA+V+     + V R++ ++ E   AQE LA + + A+L EL++ IAHE+NQPLAA+V 
Sbjct: 968  KGAIVQWNVICLDVDREVRMQEELRLAQERLARAGQAASLAELSASIAHEVNQPLAAIVA 1027

Query: 263  YANASQRYLQGLERDPQARERVGQGLQRISEQATHAAEVIRRLRAFLRKGPRRLQALDVA 322
             ++A  R+L     DP   ER     +R+   A  AA+V+ R+RA  ++       L ++
Sbjct: 1028 NSHACYRWLSA---DPVNIERAKITTERVIRDAKSAADVVSRIRALFKQSVENRGILVLS 1084

Query: 323  ELAGEAMRLCAWEAARDQVQVELRMSAQLPLVYADRVLLEQVLLNLLRNAIDANREQQGE 382
            ++  EA  L A EA R ++++ + +   L  V  DR+ ++QVL+NL+RN ++A       
Sbjct: 1085 DVISEACSLVAAEALRRRIRLNIDVETNLAPVTVDRIQVQQVLVNLIRNGMEAMDAVDDN 1144

Query: 383  RPSRILLCAARDGDGVLVEVADQGPGVA-PERLDEIFTPFTTSKADGLGLGLSMSRSLIE 441
            +   + +   +  D V +E+ D G GVA PER   IF PF T+K +G+G+GL++SRS++E
Sbjct: 1145 KTVDVRM--HQVDDEVRIEIGDNGNGVAFPER---IFEPFFTTKENGMGMGLAISRSIVE 1199

Query: 442  GFGGSLWARAGDNGG 456
              GG LWA   +  G
Sbjct: 1200 AHGGRLWAEKNEPRG 1214



 Score = 45.1 bits (105), Expect = 1e-08
 Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 156 VHTLLHPRERRQVLRQAAAALDQDGYHTMTCRVRQATGGYRWFEIASRAIRETYTGAVVE 215
           V TL+HP +   +L+    +L     +++  R+R+A G YRW +  +  +R+  +G +++
Sbjct: 365 VQTLVHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDD-SGTILQ 423

Query: 216 VVSVSRDITLRIEAQESLAHSAR 238
             ++S DI   +  QE+L  S R
Sbjct: 424 WFAISIDIDDEVRMQEALKQSER 446



 Score = 38.5 bits (88), Expect = 1e-06
 Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 15/149 (10%)

Query: 99  ERHGAREANRAR-RLYRLIIENTTDLISRHSPDG----------RFLDASPAAYRLLGLW 147
           ER  A EA RAR R +  ++      + R +PDG           FL        + G+ 
Sbjct: 589 ERKRAEEALRAREREFSQLVNMVPSYLWRLTPDGVPNFLNQRLIDFLGPDVVNANVEGVH 648

Query: 148 PEQLRGMPVHTLLHPRERRQVLRQAAAALDQDGYHTMTCRVRQATGGYRWFEIASRAIRE 207
           P       +  ++HP ++ ++      ++      +M  R+R+A G YRW E ++  +R+
Sbjct: 649 P---LAAIIGAVVHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYRWVEGSAEPMRD 705

Query: 208 TYTGAVVEVVSVSRDITLRIEAQESLAHS 236
              G +++   +S DI   +  +E+L +S
Sbjct: 706 E-EGRILQWYGLSHDIDDIMHVEEALRNS 733



 Score = 30.4 bits (67), Expect = 4e-04
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 187 RVRQATGGYRWFEIASRAIRETYTGAVVEVVSVSRDITLRIEAQESLAHSAR 238
           R R   G YRW E  ++ +R    G +V+    S DI   + AQE+L    R
Sbjct: 813 RRRLKDGNYRWIEARAQPLRRA-DGPIVQWYFASIDIEEEMRAQEALRERER 863