Pairwise Alignments

Query, 468 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 662 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  165 bits (417), Expect = 5e-45
 Identities = 124/393 (31%), Positives = 196/393 (49%), Gaps = 31/393 (7%)

Query: 94  RDASEERHGAREANRARRLYRLIIENTTDLISR-HSPDGRFLDASPAAYRLLGLWPEQLR 152
           R   ++R  A +A R    +R  +E++  +  R    DGR    +PA  R+ G   ++L 
Sbjct: 283 RGLIKKRLAAEQALRDEHAFRQAMEDSMIIGMRARDMDGRITYVNPAFCRMSGYRADELV 342

Query: 153 GM--------PVHTLLHPRERRQVLRQ-------AAAALDQDGY--HTMTCRVRQATGGY 195
           G         P     H  +   VL          A+   +DG+  HTM          Y
Sbjct: 343 GHSPPLPYWNPDSLDTHEEQNALVLTGHAPNEGFEASIRHRDGHIVHTMV---------Y 393

Query: 196 RWFEIASRAIRETYTGAVVEVVSVSRDITLRIEAQESLAHSARLATLGELASGIAHEINQ 255
               I +   +  +  +VV++    +   L+ + QE L  +ARL T+GE+AS +AHE+NQ
Sbjct: 394 ATPLIDAHGKQTGWISSVVDISERKKAQALQRQQQEKLEQTARLVTMGEMASTLAHELNQ 453

Query: 256 PLAAVVNYANASQRYLQGLERDPQARERVGQGLQRISEQATHAAEVIRRLRAFLRKGPRR 315
           PL+A+ +Y       L  LE     RE +   L +++ QA  A  +IRR+  F+R+   +
Sbjct: 454 PLSAIASYTTGC---LNRLEAGDYTREEISGALNKLALQAQRAGRIIRRVHDFVRRREPQ 510

Query: 316 LQALDVAELAGEAMRLCAWEAARDQVQVELRMSAQLPLVYADRVLLEQVLLNLLRNAIDA 375
                + E+  +++      A + QV +   + A LP + AD VLL QVL+NL+RN IDA
Sbjct: 511 RVICHLEEVIEDSIAFIEPLARKQQVHMLRLVPAHLPKLLADPVLLGQVLINLMRNGIDA 570

Query: 376 NREQQGERPSRILLCAARDGDGVLVEVADQGPGVAPERLDEIFTPFTTSKADGLGLGLSM 435
                 ER  ++++ A   GD V V +AD+G G+ PE  +++F+PF T+K +G+G+GL++
Sbjct: 571 MAATPPER-RQLIVEAQLLGDQVEVCIADRGCGIPPEVAEKLFSPFFTTKTEGMGMGLNI 629

Query: 436 SRSLIEGFGGSLWARAGDNGGLVLCCRLAVSRE 468
            RS+IE  GG LW   G  GG V    L +  E
Sbjct: 630 CRSVIEFHGGRLWFEPGAEGGTVFIFTLPLDWE 662