Pairwise Alignments

Query, 468 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 901 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  165 bits (418), Expect = 5e-45
 Identities = 102/271 (37%), Positives = 158/271 (58%), Gaps = 14/271 (5%)

Query: 196 RWFEIASRAIRETYTGAVVEVVSVSRDITLR-------IEAQESLAHSARLATLGELASG 248
           RW+ +  RAIR    G VV V  +  DIT R       ++ Q+ L  ++RL T+GE+AS 
Sbjct: 628 RWYHLHDRAIRWV-DGRVVRV-QIGTDITERKQIEEVNLQQQKRLEQTSRLITMGEMASS 685

Query: 249 IAHEINQPLAAVVNYANASQRYLQGLERDPQARERVGQGLQRISEQATHAAEVIRRLRAF 308
           +AHE+NQPLAA+ NY     + ++G    P+  E +G  +++ S QA  A ++IRR+R F
Sbjct: 686 LAHELNQPLAAIANYCMGCVKRMKGGAAKPE--ELLG-AMEKASFQAERAGKIIRRMREF 742

Query: 309 LRKG-PRRLQALDVAELAGEAMRLCAWEAARDQVQVELRMSAQLPLVYADRVLLEQVLLN 367
           ++K  P R Q L + ++  EA+     EA +  V + + +  +LP ++ADR+++EQVLLN
Sbjct: 743 VKKNEPNRGQVL-LGDIVEEALGFAEIEARKLGVNICVDLPPELPPLFADRIMIEQVLLN 801

Query: 368 LLRNAIDANREQQGERPSRILLCAARDGDGVLVEVADQGPGVAPERLDEIFTPFTTSKAD 427
           L++N I+A R+         +     D   + V VAD+G G+     +E+F PF T+K +
Sbjct: 802 LVKNGIEAMRDTLPAERRLTVSATLPDNHSLEVAVADRGHGLGSTTAEELFAPFYTTKPE 861

Query: 428 GLGLGLSMSRSLIEGFGGSLWARAGDNGGLV 458
           G+G+GL + RS+IE   G LWA A   GG V
Sbjct: 862 GMGMGLPICRSIIEYHKGRLWADANPGGGTV 892



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 12/107 (11%)

Query: 130 DGRFLDASPAAYRLLGLWPEQLRGMPVHTLLHPRERRQV---LRQAAAALDQDGYHTMTC 186
           +G+    +PA  R+LG    +LR   +   +HP +   V   LR  A    Q+      C
Sbjct: 313 EGKLRRVNPAFERVLGYPLGELRDRSLLDFVHPDDMALVVDMLRHLAEGAAQE----FEC 368

Query: 187 RVRQATGGYRWFEIASRAIRETYTGAVVEVVSVSRDITLRIEAQESL 233
           R   A G  +W   +   + E        + +V+ DIT R  A+++L
Sbjct: 369 RFHSANGQDKWLLWSINPVPEEKL-----LYAVAHDITDRKTAEQAL 410