Pairwise Alignments

Query, 210 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

Subject, 203 a.a., response regulator FixJ from Rhodopseudomonas palustris CGA009

 Score =  157 bits (396), Expect = 2e-43
 Identities = 83/203 (40%), Positives = 124/203 (61%), Gaps = 1/203 (0%)

Query: 1   MLQAKVYVVDDDQGMRDSTVWLLQSVGLQALPFASGQAFLDACVDDGPACVLLDVRMPGL 60
           M +  V+V+DDD  MR+S  +LL S G +   + S Q FLD   D    C+L DVRMPG+
Sbjct: 1   MPKGTVHVIDDDLAMRESIEFLLSSAGYEVKLYESAQTFLDL-PDVEFGCILSDVRMPGI 59

Query: 61  GGLAVQQAMRERGLMVPVIFVSGHADVPIVVRAFKAGACDFIEKPYNDQLLLDSVQAALE 120
            GL + +  +  G  +PV+ ++GH DVP+ V A K GA DFIEKP++D  L+  ++ AL+
Sbjct: 60  DGLDLLKRQKAAGSKLPVLIMTGHGDVPLAVEAMKLGASDFIEKPFDDDRLIGLIELALK 119

Query: 121 HAGLARQGDQALALVQARIDGLTPRERDVFVPLAQGLNNREIAEQLGISVKTVDLYRGRV 180
            A    + +     +  RI  L+PRER V   L  G++N+ IA +  IS +T+++YR  V
Sbjct: 120 QAQEGAKSEAVTQDIATRIQSLSPRERQVMDGLIAGMSNKVIAREFDISPRTIEVYRANV 179

Query: 181 MKRLQAGSLAELVGMAIACGAVE 203
           M ++QA SL+ELV MA+  G ++
Sbjct: 180 MTKMQATSLSELVRMAMRGGVIK 202