Pairwise Alignments

Query, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

Subject, 382 a.a., multidrug efflux system protein from Sinorhizobium meliloti 1021

 Score =  177 bits (449), Expect = 5e-49
 Identities = 125/348 (35%), Positives = 183/348 (52%), Gaps = 18/348 (5%)

Query: 12  VAPEPSRKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVAGT 71
           ++  P ++RK   +  L+LL  AG   + W++  GR+  STDDAY+ G++  I+P V+G 
Sbjct: 26  ISASPKKRRKILPVLGLVLLGAAGWYGYDWWTN-GRFLVSTDDAYIEGDIATISPKVSGY 84

Query: 72  VTSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGLYSNVDSLKAQLET 131
           V  +       V AG  L+  D  D  +A + AEA++A     +    + +   KA L  
Sbjct: 85  VAKVDVVANQHVKAGDPLVTLDDGDYRIAAEQAEAQIATQKLALSRFDAQISGAKASLAQ 144

Query: 132 RQAELRKAQQDFNRRKVLADSGAIAAEELSH----ARDDLSVA--QAAVNSARQQLSTSS 185
            +A+ +KA +   R   LA   A   +  S     +RD   VA  QA  N A  + + ++
Sbjct: 145 SEAQ-KKALEATVRGAELAQKRASELQSKSFGTDASRDSAQVALDQARANLAGAEANIAA 203

Query: 186 ALVDDTVVSSHPDVMAAAADLRQAYL-------DHARTTLVAPVTGYVAKRTVQLGQRLQ 238
           A  + TV+ +    M A + +R   L       D   T L AP  G +    VQ+G  + 
Sbjct: 204 AKANITVLEAQQ--MEAESTIRSLELARDKADRDLGFTILKAPYDGVIGNVAVQVGDLVS 261

Query: 239 PGTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGTGS 298
            G    A++P DQ++IDANFKETQ+  +  G  VEI  D Y  +    GTV S+   +GS
Sbjct: 262 AGQRLAALVPTDQLYIDANFKETQIAHLVPGSKVEIHVDAY-EDHPIEGTVASISPASGS 320

Query: 299 AFALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGLSTVVEVD 346
            F+LLPA+NATGN+ K++QRVPVRI L  D L +  LR GLS VV+VD
Sbjct: 321 VFSLLPAENATGNFTKVIQRVPVRITLPADVLAEGHLRAGLSVVVDVD 368