Pairwise Alignments

Query, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

Subject, 362 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  158 bits (399), Expect = 3e-43
 Identities = 105/307 (34%), Positives = 158/307 (51%), Gaps = 12/307 (3%)

Query: 50  ESTDDAYVNGNVVEITPLVAGTVTSIGADDGDLVHAGQVLLQFDP-------ADSEVALQ 102
           E+T++AYV G V  I+P ++G V  +   D + V AGQ+L++ D        A ++  L 
Sbjct: 45  ETTENAYVRGYVTTISPQLSGYVAEVPVRDYEEVRAGQLLVRIDDRIYVQKLAQAKATLA 104

Query: 103 SAEAKLARSVRQVRGLYSNVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELSH 162
           +  + LA S  Q     + + + +AQL+  +A L  A+  ++R + LAD G     +   
Sbjct: 105 TQRSALANSFEQELSAKAGIAASEAQLDGAKAALATARATWDRIRPLADKGVATRSDADQ 164

Query: 163 ARDDLSVAQAAVNSARQQLSTSSALVDDTV---VSSHPDVMAAAADLRQAYLDHARTTLV 219
           AR     A A V  A   L  S   +  T+         V  A A +  A +D   T +V
Sbjct: 165 ARAAFEQADAGVKQAIANLEVSRQSLATTLGARAGLEGSVAGAEAAVELAEIDLDNTRIV 224

Query: 220 APVTGYVAKRTVQLGQRLQPGTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVY 279
           AP  G + +   ++GQ +  GT  ++V+P  +VWI ANFKETQL  MR+GQPV I+ D  
Sbjct: 225 APRAGRLGEIGARVGQYVTAGTQLLSVVP-HEVWIVANFKETQLDGMRVGQPVTISVDAL 283

Query: 280 GSEVKYSGTVDSLGAGTGSAFALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGL 339
             +V   G ++      GS F+++   NATGN+ K+ QR+ VRI + P+Q     L  GL
Sbjct: 284 NRQV-LRGHIERFSPAAGSEFSIIRPDNATGNFTKVAQRLGVRIAVDPEQPMADRLAPGL 342

Query: 340 STVVEVD 346
           S VV VD
Sbjct: 343 SVVVRVD 349