Pairwise Alignments

Query, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

Subject, 365 a.a., protein secretion protein from Sinorhizobium meliloti 1021

 Score =  188 bits (477), Expect = 2e-52
 Identities = 129/352 (36%), Positives = 190/352 (53%), Gaps = 27/352 (7%)

Query: 16  PSRKRKAWLLGLLLLL--ILAGVGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVAGTVT 73
           P+RK+   ++GL L L  ++  V  W W    G    STD+AYV G+V  + P VAG VT
Sbjct: 25  PNRKK---MIGLALCLGAVVVVVAGWTWARESGA--ASTDNAYVRGDVTSLAPKVAGYVT 79

Query: 74  SIGADDGDLVHAGQVLLQFDPADSEVAL-------QSAEAKLARSVRQVRGLYSNVDSLK 126
           ++  +D   V AG VL + D  D    L       ++AEA+L     ++   ++ +   +
Sbjct: 80  AVEVEDNQAVRAGDVLFRIDDRDYRAKLAQAVANVEAAEARLTNVDAEMALQHALIRQAE 139

Query: 127 AQLETRQAELRKAQQDFNRRKVLADSGAIAAEEL-------SHARDDLSVAQAAVNSARQ 179
           AQ  +  AEL  A + ++RR+ L  S  I+   +       S A  ++  A A V + +Q
Sbjct: 140 AQRRSVVAELNLAAKAYDRRRELIRSETISQAHVDESDAAKSRAEANVLAASATVEAQQQ 199

Query: 180 QLSTSSALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQP 239
           +++  +A  +  V +    V  A A    A +D   T + APV G +  R V++G+ + P
Sbjct: 200 RIAVLAAQREAAVAA----VAQAEAARDLAGIDLESTVVRAPVGGVIGNRQVRVGRLVAP 255

Query: 240 GTATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGTGSA 299
           G + + ++PLD VWI ANFKETQL  +R GQ   IT D Y S     G VDS   G+GSA
Sbjct: 256 GASLLDIVPLDNVWIVANFKETQLEHIRPGQRASITIDGYKSGA-LEGVVDSFAPGSGSA 314

Query: 300 FALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGLSTVVEVDLHDQS 351
           F+LLPA NATGN++++VQRVPV+I  + + L    L  GLS  VE+DL   S
Sbjct: 315 FSLLPADNATGNFVRVVQRVPVKIRFAGNPLSGR-LLPGLSARVEIDLEGGS 365