Pairwise Alignments

Query, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

Subject, 390 a.a., multidrug export protein EmrA from Klebsiella michiganensis M5al

 Score =  323 bits (829), Expect = 4e-93
 Identities = 177/389 (45%), Positives = 241/389 (61%)

Query: 1   MATPTDTPTPSVAPEPSRKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGN 60
           M+   ++ TP        KRK  LL L LL I+  V    ++ +V R  E TDDAYV GN
Sbjct: 1   MSANAESQTPQQPGSKKGKRKGALLLLTLLFIIVAVAYGIYWFLVLRHFEETDDAYVAGN 60

Query: 61  VVEITPLVAGTVTSIGADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGLYS 120
            V+I   V+G+VT + AD+ D V  G  L+  D  D++ A + A+ +LA SVRQ R    
Sbjct: 61  QVQIMAQVSGSVTKVWADNTDYVQKGDPLVTLDQTDAQQAFEKAQTQLAASVRQTRQQMI 120

Query: 121 NVDSLKAQLETRQAELRKAQQDFNRRKVLADSGAIAAEELSHARDDLSVAQAAVNSARQQ 180
           N   L+A +E ++  L +AQ D NRR  L  +  I  EEL HARD ++ AQA ++ A QQ
Sbjct: 121 NSKQLQASIEVKKTALSQAQTDLNRRIPLGAANLIGREELQHARDTVASAQAELDVAIQQ 180

Query: 181 LSTSSALVDDTVVSSHPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQPG 240
            + + A+V  T +   P V+ AA ++R A+L   RT +V+P++GYV++R+VQ G ++   
Sbjct: 181 YNANQAIVLGTKLEQQPAVLQAATEVRNAWLALQRTKIVSPISGYVSRRSVQPGAQISST 240

Query: 241 TATMAVIPLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGTGSAF 300
           T  MAV+P   +WIDANFKETQL  MRIGQP  + +D+YG +VKY+G V  L  GTGSAF
Sbjct: 241 TPLMAVVPATNLWIDANFKETQLAHMRIGQPATVISDIYGDDVKYTGKVVGLDMGTGSAF 300

Query: 301 ALLPAQNATGNWIKIVQRVPVRIHLSPDQLKDHPLRIGLSTVVEVDLHDQSGPTLAQQPP 360
           +LLPAQNATGNWIK+VQR+PVRI L   QL +HPLRIGLST+VEV+  D+ G  LA Q  
Sbjct: 301 SLLPAQNATGNWIKVVQRLPVRIELDEKQLAEHPLRIGLSTLVEVNTTDRGGEMLASQVR 360

Query: 361 QKASYTTQVYDHQLMEADNLIARLIHENS 389
               Y +   +  L   + LI  +I  N+
Sbjct: 361 SSPVYESNAREIGLEPVNKLINDIIQANA 389