Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 509 a.a., Inner membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N2E2

 Score =  915 bits (2365), Expect = 0.0
 Identities = 447/511 (87%), Positives = 484/511 (94%), Gaps = 2/511 (0%)

Query: 1   MSNNAAAQFTPPSLLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSF 60
           MSNNA+  FTPPSLLL+TIGLSLATFMQVLDTTIANVALPTISGNLGVS EQGTWVITSF
Sbjct: 1   MSNNAS--FTPPSLLLSTIGLSLATFMQVLDTTIANVALPTISGNLGVSSEQGTWVITSF 58

Query: 61  AVSNAIALPLTGWLSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGP 120
           AVSNAIALPLTGWLSRRFGEVKLF+WAT+LFVLASFLCGI+ SMPEL+GFRVLQG+VAGP
Sbjct: 59  AVSNAIALPLTGWLSRRFGEVKLFLWATMLFVLASFLCGISTSMPELIGFRVLQGLVAGP 118

Query: 121 LYPMTQTLLIAVYPPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIG 180
           LYPMTQTLLIAVYPPA+RGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIG
Sbjct: 119 LYPMTQTLLIAVYPPARRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIG 178

Query: 181 LFAAAVVRQQMRTRPVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGS 240
           +FA  VV+QQ++ RPVVTS QPMDY+GL+TLIIGVGALQV+LDKGNDLDWFES+FII+G+
Sbjct: 179 VFAVLVVQQQLKARPVVTSHQPMDYVGLITLIIGVGALQVILDKGNDLDWFESNFIIIGA 238

Query: 241 LISVVFLAVFVIWELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQ 300
           LIS++ LAVFVIWE+TDRHPVVNLRLF +RNFRIGTIVLVGGYAGFFGINLILPQWLQTQ
Sbjct: 239 LISIIALAVFVIWEMTDRHPVVNLRLFAYRNFRIGTIVLVGGYAGFFGINLILPQWLQTQ 298

Query: 301 MGYTATWAGLAVAPIGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEV 360
           MGYTATWAGLAVAPIG+LPV+MSPFVGKYAHRFDLRVLAGLAFLAIG SC+MRAGFT+EV
Sbjct: 299 MGYTATWAGLAVAPIGILPVLMSPFVGKYAHRFDLRVLAGLAFLAIGLSCFMRAGFTNEV 358

Query: 361 DFQHVALVQLFMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTW 420
           DFQH+ALVQLFMGIGVALFFMPTLSIL+SDLPPHQIADG+GLATFLRTLGGSFAASLTTW
Sbjct: 359 DFQHIALVQLFMGIGVALFFMPTLSILMSDLPPHQIADGAGLATFLRTLGGSFAASLTTW 418

Query: 421 IWIRRADQHHAYLSEHISQFDPTTRHTLEQLGGASPQSYAQLEQILNGQAYMMSTVDYFT 480
           IWIRRAD HHAYLSE IS F+P TR  L QLGGAS  +YA+L+Q+L  QAYM+STVDYFT
Sbjct: 419 IWIRRADLHHAYLSESISTFEPATREALNQLGGASTPAYARLDQVLTSQAYMLSTVDYFT 478

Query: 481 LMSWVFAGLILLVWFAKPPFTAKAGPASAGH 511
           L+ W F GLI+LVW AKPPF AKAGPASAGH
Sbjct: 479 LLGWAFMGLIVLVWLAKPPFAAKAGPASAGH 509