Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 530 a.a., Inner membrane component of tripartite multidrug resistance system from Pseudomonas fluorescens FW300-N1B4

 Score =  223 bits (569), Expect = 1e-62
 Identities = 136/450 (30%), Positives = 223/450 (49%), Gaps = 5/450 (1%)

Query: 6   AAQFTPPSLLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNA 65
           AA     + +     + +  F+ +LD  I + +L  I G L    ++  WV TS+ ++  
Sbjct: 14  AANMATATKVFAFATMCIGMFIALLDIQIVSASLRDIGGGLSAGTDETAWVQTSYLIAEI 73

Query: 66  IALPLTGWLSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMT 125
           I +PL+GWLSR F    LF  + + F LAS LCG A ++  ++ FR LQG + G + P+ 
Sbjct: 74  IVIPLSGWLSRVFSTRWLFCASAVGFTLASLLCGAAWNIQSMIAFRALQGFLGGSMIPLV 133

Query: 126 QTLLIAVYPPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAA 185
            T     +   +R +A A +  V  +AP  GP++GGWITD  SW W+F+IN+  G+F A 
Sbjct: 134 FTTAFFFFTGKQRVIAAATIGAVASLAPTLGPVIGGWITDISSWHWLFYINLVPGIFVAV 193

Query: 186 VVRQQMR-TRPVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISV 244
            V   ++  +P ++  +  DY+ +L + + +G L+  L++G   +WF  S I+  + IS 
Sbjct: 194 AVPMLVKIDQPELSLLKGADYLSMLFMAVFLGCLEYTLEEGPRWNWFSDSTILTTAWISG 253

Query: 245 VFLAVFVIWELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYT 304
           +    F+   L   +P+V+LR    RNF +G         G F    + P +L    GY 
Sbjct: 254 LAGLAFIGRTLYVANPIVDLRALKDRNFALGCFFSFVTGIGLFATIYLTPLFLGRVRGYG 313

Query: 305 ATWAGLAVAPIGLLPVIMSPFVGKYAHRFDLR--VLAGLAFLAIGTSCYMRAGFTSEVDF 362
           A   GLAV   G+  ++  P     A+R DLR  ++ GL   A+  S +  +  T +   
Sbjct: 314 ALDIGLAVFSTGVFQILAIPLYAFLANRIDLRWIMMTGLGLFAL--SMWDFSPITHDWGA 371

Query: 363 QHVALVQLFMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIW 422
           + + L Q   GI   L   P +++ L  L P ++   SGL   +R LGG+   +    I 
Sbjct: 372 KELMLPQALRGIAQQLAVPPAVTLTLGGLAPARLKHASGLFNLMRNLGGAMGIAACATIL 431

Query: 423 IRRADQHHAYLSEHISQFDPTTRHTLEQLG 452
             R + H   L+E+++  +      L Q+G
Sbjct: 432 NDRTNLHFTRLAENLNSTNEALNQWLSQVG 461