Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 524 a.a., Drug resistance transporter EmrB/QacA subfamily (NCBI) from Rhodospirillum rubrum S1H

 Score =  240 bits (612), Expect = 1e-67
 Identities = 152/507 (29%), Positives = 250/507 (49%), Gaps = 24/507 (4%)

Query: 21  LSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLSRRFGE 80
           L +  FM +LD  I   +L  I   +    E+ +WV T + ++  + +PL+GWLSR    
Sbjct: 26  LVVGMFMAILDIQIVASSLAEIQAGVSAGPEEISWVQTGYLIAEVVMIPLSGWLSRLMST 85

Query: 81  VKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPPAKRGM 140
             LF  A+  F +AS LC IA ++  LV FRV+QG + G + P       A++P  K+  
Sbjct: 86  RWLFTMASGGFTIASGLCAIAWNLESLVAFRVVQGFLGGAMIPTVFAAAFALFPGKKQAG 145

Query: 141 ALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIG---LFAAAVVRQQMRTRPVV 197
              ++ +V   AP  GP +GG +T++ SW W+F +N+P+G     AAA +       P +
Sbjct: 146 VSVVIGLVATCAPALGPTIGGHLTEALSWHWLFLLNLPVGAAVTVAAATLVHFDEADPSL 205

Query: 198 TSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWELTD 257
             R  +D IG+  + + +G+LQ +L++G   DWF+S+ I+  +  + +   + V  ELT 
Sbjct: 206 LRR--IDLIGIGLVAVCLGSLQYILEEGPRDDWFDSAPIVFFTACAAIGGVLLVWRELTA 263

Query: 258 RHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGL 317
           + PVV+LR F+ RNF +G +       G +G   ++P +L           G  V   GL
Sbjct: 264 KDPVVDLRAFLDRNFVLGCLYSFITGVGLYGAVYLMPLFLARVRDLNPAQIGEVVMITGL 323

Query: 318 LPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQLFMGIGVA 377
              + +P  G  + + DLRV+     L      ++    T + D+    L Q   G+ + 
Sbjct: 324 FQFLSAPLAGALSRKLDLRVMLSFGLLMFALGLWLNTHLTHDWDYWEFFLPQAVRGVSLM 383

Query: 378 LFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAYLSEHI 437
             F+P   + L  LP  ++ + SGL   +R LGG+   +  T +   +   H++YL+E++
Sbjct: 384 FIFIPINRLSLGTLPKEKLGNASGLYNLMRNLGGAIGLAAITTMLTDQTKIHYSYLAENV 443

Query: 438 --------SQFDPTTRHTLEQLGGASPQ-SYAQLEQILNGQAYMMSTVDYFTLMSWVFA- 487
                   +      RH    LG +S Q +  Q+ QI+  +A +M+  D FT ++ VFA 
Sbjct: 444 TTARLAAEATLSGMERHFDPVLGSSSAQAALGQVRQIVMREATVMAFADVFTAVAVVFAF 503

Query: 488 GLILLVWFAKPPFTAKA---GPASAGH 511
           GL+L+      PF  K    GP   GH
Sbjct: 504 GLLLM------PFVHKVGGNGPDGGGH 524