Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 511 a.a., multidrug efflux MFS transporter permease subunit EmrB from Pantoea sp. MT58

 Score =  510 bits (1314), Expect = e-149
 Identities = 250/500 (50%), Positives = 345/500 (69%), Gaps = 4/500 (0%)

Query: 14  LLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGW 73
           L+L T+ LSLATFMQVLD+TIANVA+PTI+GNLG S  QGTWVITSF V+NAI++PLTGW
Sbjct: 11  LVLMTVALSLATFMQVLDSTIANVAIPTIAGNLGASNSQGTWVITSFGVANAISIPLTGW 70

Query: 74  LSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVY 133
           L++R GEVKLF W+T+LF +AS+ CG++ S+  L+ FRV+QG+VAGPL P++Q+LL+  Y
Sbjct: 71  LAKRIGEVKLFTWSTILFAIASWACGMSDSLEMLIFFRVIQGIVAGPLIPLSQSLLLNNY 130

Query: 134 PPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRT 193
           PPAKR +AL+L AM  +VAPI GPILGGWI+D+Y W WIFFINVPIG+    +  Q +R 
Sbjct: 131 PPAKRSLALSLWAMTVIVAPICGPILGGWISDNYHWGWIFFINVPIGVAVVILTLQTLRG 190

Query: 194 RPVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIW 253
           R   T  + +D +GL+ L++G+G LQV+LD+G +LDWF S  IIV  +++++ L V ++W
Sbjct: 191 RETKTEIRRIDMVGLVLLVVGIGCLQVMLDRGKELDWFNSVEIIVLGVVALIALTVLLVW 250

Query: 254 ELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVA 313
           ELTD HP+++L LF  RNF IG + +   Y  +FG  ++LPQ LQ   GYTATWAGLA A
Sbjct: 251 ELTDDHPIIDLSLFKSRNFTIGCLSISLAYMLYFGSIVLLPQLLQEVYGYTATWAGLASA 310

Query: 314 PIGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRA-GFTSEVDFQHVALVQLFM 372
           P+G++PVI+SP +G++AH+ D+R L   +F+      Y RA  F   +DF   A  Q   
Sbjct: 311 PVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAICFYWRAYTFEPGMDFGASAWPQFIQ 370

Query: 373 GIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAY 432
           G  VA FFMP  +I LS LPP ++A  S L+ F+RT  GS   S+TT +W  R   HH+Y
Sbjct: 371 GFAVACFFMPLTTITLSGLPPERMAAASSLSNFMRTFAGSVGTSITTTMWTNRESMHHSY 430

Query: 433 LSEHISQFDPTTRH---TLEQLGGASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAGL 489
           ++E I+ ++  ++     LE LG    Q+ A + Q +  Q  ++S  + F   + VF  L
Sbjct: 431 MTESITPYNVNSQQMYSQLESLGMTQQQASAYIAQQITNQGLIISANEIFWASAGVFLIL 490

Query: 490 ILLVWFAKPPFTAKAGPASA 509
           ++L+WFA+PPF A  G   A
Sbjct: 491 LVLIWFARPPFGAGGGGGGA 510