Pairwise Alignments

Query, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

Subject, 512 a.a., multidrug effux MFS transporter subunit EmrB from Klebsiella michiganensis M5al

 Score =  504 bits (1298), Expect = e-147
 Identities = 248/500 (49%), Positives = 347/500 (69%), Gaps = 4/500 (0%)

Query: 14  LLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGW 73
           L++ TI LSLATFMQVLD+TIANVA+PTI+GNLG S  QGTWVITSF V+NAI++P+TGW
Sbjct: 12  LVIMTIALSLATFMQVLDSTIANVAIPTIAGNLGSSLSQGTWVITSFGVANAISIPITGW 71

Query: 74  LSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVY 133
           L++R GEVKLF+W+T+ F +AS+ CG++ S+  L+ FRV+QG+VAGPL P++Q+LL++ Y
Sbjct: 72  LAKRVGEVKLFLWSTVAFAIASWACGMSNSLTMLIFFRVIQGIVAGPLIPLSQSLLLSNY 131

Query: 134 PPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRT 193
           PPAKR +ALAL +M  +VAPI GPILGG+I+D+Y W WIFFINVPIG+    +  Q +R 
Sbjct: 132 PPAKRSIALALWSMTVIVAPICGPILGGYISDNYHWGWIFFINVPIGIAVVVMTLQTLRN 191

Query: 194 RPVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIW 253
           R   T ++ +D +GL  LIIG+G+LQV+LD+G +LDWF S+ II+ ++++VV ++  ++W
Sbjct: 192 RETRTEQRRIDGVGLALLIIGIGSLQVMLDRGKELDWFASNEIIILTIVAVVAISFLIVW 251

Query: 254 ELTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVA 313
           ELTD +P+V+L LF  RNF IG + +   Y  +FG  ++LPQ LQ   GYTATWAGLA A
Sbjct: 252 ELTDDNPIVDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASA 311

Query: 314 PIGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRA-GFTSEVDFQHVALVQLFM 372
           P+G++PVI+SP +G++AH+ D+R L   +F+      Y RA  F   +DF   A  Q   
Sbjct: 312 PVGVIPVILSPIIGRFAHKLDMRRLVTFSFIMYAVCFYWRAWTFEPGMDFGASAWPQFIQ 371

Query: 373 GIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAY 432
           G  VA FFMP  +I LS LPP ++A  S L+ F RTL GS   S+TT +W  R   HHA 
Sbjct: 372 GFAVACFFMPLTTITLSGLPPERLAAASSLSNFTRTLAGSIGTSITTTMWTNREALHHAQ 431

Query: 433 LSEHISQFDPTTRHTLEQLGG---ASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAGL 489
           L+E ++ ++P  +   +QL G      Q+   + Q +  Q  ++S  + F   + +F  L
Sbjct: 432 LTESVTPYNPNAQQMYDQLQGLGMTQQQASGWIAQQITNQGLIISANEIFWFSAAIFILL 491

Query: 490 ILLVWFAKPPFTAKAGPASA 509
           + LVWFA+PPF+A  G   A
Sbjct: 492 LGLVWFARPPFSAGGGGGGA 511