Pairwise Alignments

Query, 688 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 801 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  259 bits (662), Expect = 3e-73
 Identities = 153/420 (36%), Positives = 243/420 (57%), Gaps = 19/420 (4%)

Query: 270 FNALRDPKGEVQGAFLFAY---DISERVQEQERLAKAEAALRQAQKMEAVGQLSGGIAHD 326
           ++A RD   E+      A    ++  ++QE+ER+   EA L+Q Q++EAVGQL+ G+AHD
Sbjct: 382 YSAARDITSEIAAVDKLAEANRELRAQIQERERV---EATLQQMQRLEAVGQLTAGVAHD 438

Query: 327 FNNLLGGILGAQELMRQRLDQSR-FDALAPLLELSSSAAQRASSLVHRLLAFSRQQTLQP 385
           FNNLL  IL +   ++  L+Q    +     L+    + +R ++L  +LLAF+R+Q L P
Sbjct: 439 FNNLLTVILTSASFLQNDLEQGAPAERSLRRLQYIRESGERGATLTSQLLAFARRQQLTP 498

Query: 386 CSTQVATLVAGMEDLLRRTIGPAITLSSRFASQLWPTFIDPPQLESALLNLCINARDAMP 445
            +  +   +  +  LL+ T+G ++++ +   + +W   +DP Q+E  +LNL INARDAM 
Sbjct: 499 TAIDLNDTLVSLLSLLKSTLGGSVSIETDTQANIWHALVDPTQIEMIILNLAINARDAMG 558

Query: 446 AGGVIEIIGDNLLLDDEQAVALELPASEFVRLSIVDNGSGMSAEVVERAVEPFFTTKPMG 505
             G + +   N+++ +    A +    E+V LS+ D G+GMS EV+ +A EPFFTTK +G
Sbjct: 559 DSGRLTLGTRNVVITEPALRAEDPSPGEYVVLSVTDTGTGMSEEVLSKAFEPFFTTKEVG 618

Query: 506 QGTGLGLSMTYGFVRQSGGQLRVLSVPGEGTRIELLLPRHHEQAQAPISKPPRTLLQRSS 565
           +G+GLGL+  +GF +QSGG  R+ S PG GT +++ LPR     + P +  P   L   S
Sbjct: 619 KGSGLGLAQVFGFAKQSGGGARIESRPGAGTTVKVFLPR----TEPPAATEPTAALSAGS 674

Query: 566 E---AAKRILLVEDQTALRLVIGEVLEELGYRVDAFENGPSALTHLQSGERPDLLLSDVG 622
           +   +  RILLV+D  A+R V  ++L+ LG+ V   ++G  AL  L  G   DLLL+D  
Sbjct: 675 QEDNSQHRILLVDDDHAVREVTAQMLQNLGFAVIEADSGEHALQLLGEGIEVDLLLADFA 734

Query: 623 LPGGLNGRQVAERFRERYPDLKVLLITGYDESAAFSDGQPLQGTLVLTKPFELEALAERV 682
           +P G+NG ++A   R   P+L V+ +TGY E         L G  ++ KPF  + LA ++
Sbjct: 735 MP-GMNGGELARAVRVGQPELPVIFVTGYAELCELG----LVGYSIIQKPFREDQLANKI 789