Pairwise Alignments

Query, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1581 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  303 bits (775), Expect = 4e-86
 Identities = 171/393 (43%), Positives = 238/393 (60%), Gaps = 6/393 (1%)

Query: 154  EQERLQQAEEALRQAQKMEAVGQLTGGIAHDFNNLLASILGALELAGQRLVQQRLADTTQ 213
            E    ++AE+ALR AQKMEA+GQLTGG+AHDFNN+L  +LGAL+L  +R+      D  +
Sbjct: 1191 EMAERERAEDALRHAQKMEAIGQLTGGLAHDFNNMLTGVLGALDLIQRRVANGVTGDLDR 1250

Query: 214  LLELSRHNAQRAAALVQRLLAFSRQQTLVPQRVDVQQLVAGMHDLISSSTGPYVDYHDQT 273
             ++ +  +A RAAAL  RLLAF+R+Q+L P+ VDV  LV  M D++  + G ++    + 
Sbjct: 1251 YIDAATTSANRAAALTHRLLAFARRQSLDPKPVDVNLLVVSMEDMLRRTMGEHIQLEVEL 1310

Query: 274  HAGLWPIRIDAQQLENALLNLCINARDAMPLGGTLSIGCANVEVQGAEARQLGLAAGRFL 333
             +  W    D  QLENALLNL INARDAMP GG L +   NV +Q  +        G ++
Sbjct: 1311 QSDAWIAYTDGHQLENALLNLVINARDAMPDGGRLGVNTCNVRIQHHQPD--APEPGDYV 1368

Query: 334  RIRVEDTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSMVYGFVRQSGGQLVIDSTLGQG 393
             + V D G GMS   + +A +PFFTTKP+GQGTGLGLSMVYGF +Q+GG + IDS LG+G
Sbjct: 1369 VLSVTDNGSGMSAQTIAKAFDPFFTTKPIGQGTGLGLSMVYGFAKQTGGHVRIDSRLGEG 1428

Query: 394  TAINLYLPCDESIAAASPSPHVEGPAPAASLQQRVCKVMLVEDEPALRLVMLEVLLDQGH 453
            T + LYLP +++  A  P P  +   P+A   +    V++VEDE A+R++++EVL + G+
Sbjct: 1429 TQVILYLPRNQAEDAPPPGPQQQTEVPSAMHGE---TVLVVEDEAAVRMLVVEVLNELGY 1485

Query: 454  EVQAFEDGRQAYKALQEAPAPDLLITDVGLPGGIDGYQLADACRGIAPHAAVLLITGYDL 513
            +V    D   A   L      DLLITD GLP G++G QL ++ R   P   VL ITGY  
Sbjct: 1486 QVLEACDAGSALPHLHSEQHLDLLITDFGLP-GLNGRQLVESARQHRPELKVLFITGYVP 1544

Query: 514  AHSTAKARPHRRTELLAKPFDLQALAQALERLL 546
                         ++L KPF +  LA  + +L+
Sbjct: 1545 DEEMRNDFLGPGMDILPKPFSIDILAARIRKLI 1577