Pairwise Alignments

Query, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 821 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  342 bits (877), Expect = 3e-98
 Identities = 194/403 (48%), Positives = 259/403 (64%), Gaps = 10/403 (2%)

Query: 148 ITQRVTEQE-RLQQAEEALRQAQKMEAVGQLTGGIAHDFNNLLASILGALELAGQRLVQQ 206
           + QRV E+   L QAEE LRQ+QKMEAVGQLTGG+AHDFNNLLA I GALEL   R+ Q 
Sbjct: 423 LEQRVAERTAELIQAEEKLRQSQKMEAVGQLTGGLAHDFNNLLAGISGALELMSMRIAQG 482

Query: 207 RLADTTQLLELSRHNAQRAAALVQRLLAFSRQQTLVPQRVDVQQLVAGMHDLISSSTGPY 266
           RL D  + +  ++  A+RAAAL  RLLAFSR+QTL P+ VDV  LV GM +LI  + GP 
Sbjct: 483 RLNDIDKYMLSAQSAAKRAAALTHRLLAFSRRQTLDPRPVDVNLLVEGMTELIQRTVGPS 542

Query: 267 VDYHDQTHAGLWPIRIDAQQLENALLNLCINARDAMPLGGTLSIGCANVEVQGAEARQLG 326
           +     +   LWP  +D  QLENA+LNLCIN+RDAMP GG ++I  AN  +    A+   
Sbjct: 543 IRLETISAPDLWPASVDTSQLENAILNLCINSRDAMPDGGRITIETANQWLDSDAAQAND 602

Query: 327 LAAGRFLRIRVEDTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSMVYGFVRQSGGQLVI 386
           L AG +L + V DTG GM+  V+ +A +PFFTTKP+G+GTGLGLSM+YGF +QSGGQ+ I
Sbjct: 603 LPAGEYLSLTVTDTGTGMTPGVIAKAFDPFFTTKPIGEGTGLGLSMIYGFAKQSGGQVRI 662

Query: 387 DSTLGQGTAINLYLP---CDESIAAASPSPHVEGPAPAASLQQRVCKVMLVEDEPALRLV 443
            S +G+GTA+ +YLP    +  I A  P+        AA+L      +++V+DEP +R++
Sbjct: 663 SSEVGRGTAMCIYLPRHLGETGIGAVVPA------QTAAALTGSCGTILIVDDEPTVRML 716

Query: 444 MLEVLLDQGHEVQAFEDGRQAYKALQEAPAPDLLITDVGLPGGIDGYQLADACRGIAPHA 503
           +++VL D G+ +    D     K LQ   + DLLITDVGLPGG++G Q+ADA R +    
Sbjct: 717 LMDVLGDLGYTLIEASDSVAGLKLLQSDVSIDLLITDVGLPGGMNGRQMADAGREVRQEL 776

Query: 504 AVLLITGYDLAHSTAKARPHRRTELLAKPFDLQALAQALERLL 546
             L ITGY  + +   +      ++L KPF + ALA  +  LL
Sbjct: 777 KTLFITGYAESAALGNSSLGVGMQVLTKPFSIDALAARVLELL 819