Pairwise Alignments

Query, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 680 a.a., signal transduction histidine kinase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  215 bits (548), Expect = 4e-60
 Identities = 151/396 (38%), Positives = 213/396 (53%), Gaps = 33/396 (8%)

Query: 162 EEALRQAQKMEAVGQLTGGIAHDFNNLLASILGALELAGQRLVQQRLADTTQLLELSRHN 221
           E+ + +AQKM+A+GQL GGIAHDFNN+L  + G LEL   +   +RL +    L  +  +
Sbjct: 291 EKTVSRAQKMQAIGQLVGGIAHDFNNILGVLKGNLELIQLKNKDERLEN---YLTTALKS 347

Query: 222 AQRAAALVQRLLAFSRQQTLVPQRVDVQQLVAGMHDLISSSTGPYVDYHDQTHAGLWPIR 281
            QR   L +RLL FSRQ+    Q   V +++ G+ DL + S    V  + Q       + 
Sbjct: 348 CQRGTELTRRLLQFSRQEQFNAQHCQVNEVIEGLRDLFAKSLTSQVALNVQLAPFTRDVM 407

Query: 282 IDAQQLENALLNLCINARDAMPLGGTLSIGCANVEVQG---AEARQLGLAAGRFLRIRVE 338
           +D   LE+ALLNL INA+DAM   G L+I     E+ G       ++ +    ++ I V 
Sbjct: 408 VDKGDLEDALLNLVINAKDAMNGEGALTIATGESELAGFLPGIGERVLVEPSCYVWISVT 467

Query: 339 DTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSMVYGFVRQSGGQLVIDSTLGQGTAINL 398
           D G G+   ++ +  EPFFTTK   +GTGLGLSMVYGFV++S G + +  T  QGT I L
Sbjct: 468 DAGHGIPIQLLDKIFEPFFTTKDKSKGTGLGLSMVYGFVKRSRGYMNVLKTGPQGTEIRL 527

Query: 399 YLPC--------DESIAAASPSPHVEGPAPAASLQQRVCKVMLVEDEPALRLVMLEVLLD 450
           + P          +++AA +  P V+ P           K +LV+DEP L  VM +    
Sbjct: 528 WFPAVTIKQAASAKALAAETSIPRVDSP----------LKALLVDDEPELLQVMRDYCEL 577

Query: 451 QGHEVQAFEDGRQAYKALQ-EAPAPDLLITDVGLPGGIDGYQLADACRGIAPH-AAVLLI 508
            G EV+ F DG       Q +     LLITDV +PGGI+GY+LA     IA H   VLL+
Sbjct: 578 MGMEVETFSDGVTFRNNFQSKVLDAGLLITDVLMPGGINGYELASDV--IAKHPMPVLLV 635

Query: 509 TGY--DLAHSTAKARPHRRTELLAKPFDLQALAQAL 542
           +G+  D+  +  +  P +   +L KPFDL A A AL
Sbjct: 636 SGFIEDIGVNRYEEMPFK---VLHKPFDLHAFANAL 668