Pairwise Alignments

Query, 553 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 678 a.a., PAS/PAC sensor hybrid histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  198 bits (503), Expect = 6e-55
 Identities = 140/418 (33%), Positives = 221/418 (52%), Gaps = 24/418 (5%)

Query: 136 QRIQGGYLFAYDITQRVTEQERLQQAEEALRQAQKMEAVGQLTGGIAHDFNNLLASILGA 195
           ++ + G LF   + + +TEQ+ +Q     + + QKM+A+GQL GG+AHDFNN+L  + G 
Sbjct: 267 EQYEDGSLFTL-VGRDITEQKLMQNT---MARTQKMQAMGQLVGGVAHDFNNILGVLKGN 322

Query: 196 LELAGQRLVQQRLADTTQLLELSRHNAQRAAALVQRLLAFSRQQTLVPQRVDVQQLVAGM 255
           LEL   +   + +A   + L  +    QR   L +RLL FSRQ+    Q V V +++  +
Sbjct: 323 LELMELKGKDESIA---RYLATALKACQRGTDLTRRLLQFSRQEQFSAQPVQVNEVLQSL 379

Query: 256 HDLISSSTGPYVDYHDQTHAGLWPIRIDAQQLENALLNLCINARDAMPLGGTLSIGCANV 315
            +L+  S    V  + Q    +  I +D   LE+AL+NL +NA+DAM   G ++I     
Sbjct: 380 EELLEKSLTTQVSLNIQPQPSMRDICVDRGDLEDALINLVLNAKDAMHGEGQITIVTGEQ 439

Query: 316 EVQG---AEARQLGLAAGRFLRIRVEDTGMGMSKAVMQRALEPFFTTKPLGQGTGLGLSM 372
            + G        +      ++ + V D G G+   ++ +  EPFFTTK   +GTGLGLSM
Sbjct: 440 YLSGYLPGVGNTVSTDNRDYVWVSVIDQGGGIPDNLLDKIFEPFFTTKDKSKGTGLGLSM 499

Query: 373 VYGFVRQSGGQLVIDSTLGQGTAINLYLPCDESIAAASPSPH--VEGPAPAASLQQRVCK 430
           VYGFV++S G + I  T   GT I L+ P  + +       H  +E P  A  +     K
Sbjct: 500 VYGFVKRSNGYMSIMRTGADGTEIRLWFPAIKPVERQIERQHSPLEYPKVAHPI-----K 554

Query: 431 VMLVEDEPALRLVMLEVLLDQGHEVQAFEDGRQAYKALQEA-PAPDLLITDVGLPGGIDG 489
           V++V+DEP L  V+ +     G EV A+ D     +  ++     DL+I+D+ +PGGI+G
Sbjct: 555 VLIVDDEPDLLEVLCDYCQMMGMEVLAYTDPLLVKEQFKDGIDNIDLIISDLLMPGGING 614

Query: 490 YQLADACRGIAPHAAVLLITGY--DLAHSTAKARPHRRTELLAKPFDLQALAQALERL 545
           Y+L      +     VLLI+GY  D+  S+ +  P    ++L KPFD++A  + LE +
Sbjct: 615 YELVTDL-SVHRTIPVLLISGYVGDVGISSREDLPF---QVLQKPFDIRAFVRGLEEI 668