Pairwise Alignments

Query, 292 a.a., transcriptional regulator from Pseudomonas putida KT2440

Subject, 252 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)

Query: 36  RLHHWEIKPHQHAELFQLLYVQRGQAQVEIEGVRSAIGEAAIQVVPPMTVHGFRFSADIQ 95
           R +H ++  H H    QL++  +G  + EI G  S +GE ++ V+P  T H    ++   
Sbjct: 5   RNYHHDVIAHSHDHP-QLVFGLKGLLEFEIGGRVSCVGEQSLAVIPSATHHACASTSGSH 63

Query: 96  GYVLTFGTA--LVANLEQRLGAPLTVLAQPACYPLGRDRVHLRSLVDTLQREYQGSAPAR 153
             VL   +   +  NL       L +L +P    L   +   +SLV  L R     +P  
Sbjct: 64  CLVLDLPSENWVRENLGHHAERSLRLLDRPDTPRLAPAQ---QSLVAWLAR-----SPIN 115

Query: 154 AAMLEALVTALMVWISRRQQQGQAPRNRDERDRLLLGQYLRLVEAHYREHLSVEAFAARL 213
            +++ A  TAL+  ++      Q PR   +R  L L      ++ H    L V   A   
Sbjct: 116 DSVIAAQGTALL--LASLANTDQPPR---DRHGLPLAAVDAFIDQHLPHPLQVADLARIA 170

Query: 214 NVPSLQLNQLCRALSGQTALQVVHQRLLLEARRNLIYTRMSIGQLSDSLGFTDPTYFARW 273
                +L+      +G+T ++ V +R L  A   L  TR+ +G+++  +G+   + F   
Sbjct: 171 GCSVARLHARFLHETGKTPMEYVRERRLQHAEALLHDTRLPVGEIAARVGYASQSAFTAA 230

Query: 274 FKRLSGQTPNAYRR 287
             R+ G++P   RR
Sbjct: 231 LVRVHGRSPRMLRR 244