Pairwise Alignments

Query, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 287 a.a., LysR substrate-binding domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  226 bits (577), Expect = 4e-64
 Identities = 119/277 (42%), Positives = 171/277 (61%), Gaps = 1/277 (0%)

Query: 11  LFDLDLLRAIVVVADCGSFTTAAARLHSTQSTISQKVRRLEDMVGHRLLVRGNRDVLPTD 70
           + DL+LLR+ V V + G FT A  R+H TQST+SQ+++RLED +G +LL R  +DVLPT+
Sbjct: 1   MLDLELLRSFVSVVEAGGFTRAGQRVHRTQSTVSQQIKRLEDDLGQQLLDRSGKDVLPTE 60

Query: 71  AGQTLLGYARHMLALNDQMLEALAGAMVGTTVRLGVPEDFVGGRTTNALSAFSRLHPQVK 130
           AG+ LL YAR +LAL ++  + +        VRLG+PEDF   R    L  FSR  P ++
Sbjct: 61  AGERLLSYARRLLALAEEARDVVGRPSTEGAVRLGIPEDFALYRLPRLLGNFSRARPGLR 120

Query: 131 LEVTSGLCRDLSQAYDNGELDLVLLKQRRNSREGVACWPERLQWIDSARTPAF-ELDPIP 189
           L+V +    +L +  + G+LDLVLLK+       VA WPER+ W++S   P   +   +P
Sbjct: 121 LDVRADQSLNLKRDLERGDLDLVLLKREAGGAGAVAAWPERVYWVNSKSHPCNPKAGSVP 180

Query: 190 LVTFPPRGLYREDMINAIEGMGRRWRISFTSSSLSGIQAAVADGMGISLLPPRAATGEHR 249
           L+ FP   LYR   I+AIE  GRRW +++TSSSL+GIQAAVA G+G+S+L   +   +HR
Sbjct: 181 LIFFPGGCLYRRRAIHAIEAAGRRWHMAYTSSSLAGIQAAVAAGLGLSILSEISIQADHR 240

Query: 250 VLGAGQGLPEVDSYEIVIVHRPTADVMVKALAEVMTQ 286
            L A  G P +D  E+ ++  P A      LA+ + +
Sbjct: 241 KLTARDGFPPIDRTELALIAAPQASPATLRLADRLAE 277