Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 335 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  114 bits (284), Expect = 5e-30
 Identities = 84/300 (28%), Positives = 144/300 (48%), Gaps = 8/300 (2%)

Query: 27  QAPYRVDFILLEHFSMASFTVAMDVLVTANLLRA-DSFQFTPLSLDGDRVLSDLGLELVA 85
           Q+   V  ++L   S+ SF   +D +  AN +   + F++  LS DG  V+   G+  +A
Sbjct: 10  QSSIEVVVVVLPESSIMSFASVLDPMRAANRVAGHEVFRWRLLSADGQAVMLTCGVP-IA 68

Query: 86  TELSAAALKELDLLVVCGGLRTPLKYPE-LDRLLNDCAAHGMALGGLWNGAWFLGRAGVL 144
            + S       DLL++ GG        +     L +CA H   + G+ +G W LGR+G++
Sbjct: 69  VDGSFTLPVVGDLLLIIGGFNLHRHAGKRFLATLQECARHFDIVAGVESGCWLLGRSGLI 128

Query: 145 DDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGL 204
           +    + H E+    S+  P+  +    F +D    ++   +   ++ML LV    G  L
Sbjct: 129 NGRKATAHWEELEDFSQAFPELEVIGDRFVIDGKYWTSGGASPTFDMMLHLVAERLGPAL 188

Query: 205 AEGVEEILSFS---GARYRQ--VGPGAKKSMSLHLRTIVELMENNLEETLSLDQLAAYSG 259
           A  V  I  +    G    Q  V  G  ++    L   + LME  LE  +++  LA    
Sbjct: 189 ALDVASIFVYDQMHGPTDVQPFVSLGRIEARDPELAAAIRLMERTLERPMTVAALARRLS 248

Query: 260 RSRRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCY 319
            S+R+++ LF   L TSP  YY+ LR+  + RL++ + + + ++A+ CGF S+S FS+ Y
Sbjct: 249 VSQRKLETLFAKGLSTSPGAYYLRLRLQVAHRLVRDTGIPMRDIALRCGFDSLSAFSRAY 308