Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 342 a.a., putative HTH-type transcriptional regulator, AraC family from Phaeobacter inhibens DSM 17395

 Score = 87.4 bits (215), Expect = 5e-22
 Identities = 82/304 (26%), Positives = 138/304 (45%), Gaps = 10/304 (3%)

Query: 30  YRVDFILLEHFSMASFTVAMDVLVTAN-LLRADSFQFTPLSLDGDRVLSDLGLELVATEL 88
           ++VD IL E F +  F+  ++ L  AN +L    F +T  S  G RV S  G   V TE 
Sbjct: 22  WQVDIILTEGFVLTEFSAVVEPLRLANRVLAQPPFSWTMRSAGGGRVGSRAGA-FVETE- 79

Query: 89  SAAALKELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYG 148
             AA  + D + V G          +  L++     G  +  L   A    R    +   
Sbjct: 80  PFAAKADADCVFVLGNTDPDCPALSMGSLISTYRTRGAKVYLLAEAASRYIRDSGKEGAQ 139

Query: 149 CSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEGV 208
            + H E    + ER        A  + D   ++ A     ++++L L+ +L        V
Sbjct: 140 HTTHWENANLMRERIGLFDTNFALASEDGQVVTCAGMGATVDIVLALIGQLTTAAAQVTV 199

Query: 209 EEILSFSGAR-YRQVGP--GAKKSMS--LHLRTIVELMENNLEETLSLDQLAAYSGRSRR 263
             IL     R +  + P  G K +++    L   + +M+ ++E+ L ++++  + G S R
Sbjct: 200 ANILLHDKVRDFASLQPFSGVKPTITGDADLDQAIHVMQEHIEDPLPINEIVDHLGISTR 259

Query: 264 QIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCYAAYF 323
            ++R F+  LGT+P  +Y E+R+ K+  LL  + +SV E+ +ACGF   + FS  Y A+F
Sbjct: 260 SLERKFKTFLGTTPNGFYREMRLNKANNLLLNTTMSVREIGLACGF--SNGFSTLYKAFF 317

Query: 324 GYPP 327
           G  P
Sbjct: 318 GITP 321