Pairwise Alignments

Query, 318 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 278 a.a., transcriptional activator RhaS from Klebsiella michiganensis M5al

 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 37/259 (14%)

Query: 77  HEAFYLVTVPHGSEVH-FEQDGHQISCSPGGFIVERGDAPYRFHYGTQNDLWVLKLPERA 135
           H+   +V V HG+ +H F    + IS     FI +      R  Y   ++L +  +  RA
Sbjct: 33  HDFHEIVIVEHGTGIHVFNGQPYTISGGSVCFIRDHD----RHLYEHTDNLCLTNVLYRA 88

Query: 136 LKA-----------------NLLGHKRYTRHCFDARQGLGRIFVEQLDLCARHFDTSPPA 178
             A                 N L H R  +    A Q + +I VEQ++      D    A
Sbjct: 89  PDAFRFLSGLNALLPQEQEGNYLSHWRVNQ---SALQQVRQI-VEQMEEVGADADMHAIA 144

Query: 179 ARHLLLEQASATLLLALQQDERVLGSEGSNLSTLHLTRVEQYVQQNLGDPELSPQTIAGA 238
           +R +L  Q    LL+ L++      +EG++ +   L  +  +++ +  + ++  + +A  
Sbjct: 145 SREILFMQ----LLVHLRKSSL---AEGASDNEARLNHLMAWLEDHFAE-DICWEEVAAR 196

Query: 239 CGLSLRYLHK-LFAITPYTLNEWVRLQRLEAVHRQLRDPHCHLAIGELAFRWGFADQAQF 297
             LSLR LH+ L   T  T   ++   RL      LR  H   ++ ++A+R GF D   F
Sbjct: 197 FSLSLRTLHRQLKQQTGLTPQRYLNRVRLMKARHLLR--HSDDSVTDIAYRCGFGDSNHF 254

Query: 298 TRAFRQQYGCTASEVRATR 316
           +  FR+++  +  ++R  R
Sbjct: 255 STLFRREFAWSPRDIRQGR 273