Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 522 a.a., Mobile element protein from Pseudomonas fluorescens FW300-N2E2

 Score =  773 bits (1995), Expect = 0.0
 Identities = 384/521 (73%), Positives = 422/521 (80%), Gaps = 11/521 (2%)

Query: 1   MTFSPNLDQMTPEQLRALAAQALQ-----------LQSQVEAMSKKIQNDEILIEQFKFE 49
           MT  PNLD +TPEQLRALAAQ +Q           L   VE M KKI  D+ +IE+   E
Sbjct: 1   MTSLPNLDHLTPEQLRALAAQLIQRVETLDHQVDTLGKTVETMGKKINRDQTVIEKLTHE 60

Query: 50  IALLKRHKFAKRSEQISPAQGSLLDDLLDTDLEAIEAELKQLLPASSQAEPRQSPKRAPL 109
           IA LKR KFAKRSEQ++P Q  LLDDL+DTD+ AIEAEL+ L    +  E +Q PKR  L
Sbjct: 61  IAQLKRLKFAKRSEQMNPEQAGLLDDLVDTDIAAIEAELQALQTVLAPTEKKQKPKRTAL 120

Query: 110 PPQFPRTVIRHEPENTQCACGCQLQRIGEDVSEKLDYTPGVFTVEHHVRGKWACRQCETL 169
             +FPRT+I HEP+NT C C C L+RIGEDVSEKLDYTPGVFTVE H+RGKW C  CETL
Sbjct: 121 SAEFPRTLIHHEPDNTHCPCACALKRIGEDVSEKLDYTPGVFTVERHIRGKWVCDDCETL 180

Query: 170 IQAPVPAQVIDKGVPTAGLLAHVMVAKFADHLPLYRQEKIFGRAGLAIARSTLAQWVGQT 229
           IQAPVPAQVIDKG+PTAGLLAHVM+AKFADHLPLYRQE IFGRAGLAI RSTLAQWVG T
Sbjct: 181 IQAPVPAQVIDKGIPTAGLLAHVMIAKFADHLPLYRQESIFGRAGLAIPRSTLAQWVGVT 240

Query: 230 GVRLQPLVDALREAVLNQGVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALNAVVYD 289
           GV+LQPLVDALR+ VL Q VIHADETPVQML PG KKT R+YVWAY+T+ FS L AVVYD
Sbjct: 241 GVQLQPLVDALRDVVLGQQVIHADETPVQMLVPGSKKTQRSYVWAYTTSQFSNLAAVVYD 300

Query: 290 FSPSRAGEHARNFLGDWNGKLVCDDFAGYKAGFEQGITEIGCMAHARRKFFDLHVANKSQ 349
           FSPSRAGEHARNFL DW  KLVCDDF GYKA FE G+TEIGCMAHARRKFF+LH  NKS 
Sbjct: 301 FSPSRAGEHARNFLQDWKCKLVCDDFGGYKASFELGVTEIGCMAHARRKFFELHATNKST 360

Query: 350 LAEQALHSISGLYEVERQARDMSDEDRWRIRQEMAVPILKTLHDWMLAQRDLVPNGSATA 409
           LAEQAL  I  LYE+E + RD+  + R RIRQE AVP++  LH WM+AQRDLVP GSA +
Sbjct: 361 LAEQALRYIQLLYEIESEVRDLEPDLRRRIRQERAVPVMDMLHAWMIAQRDLVPEGSAIS 420

Query: 410 KALDYSLKRWVALTRYLDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMS 469
           +ALDYSLKRW AL+RYLDDG VPIDNN  ENQIRPWALGR NWLFAGSLRSGKRAAAIMS
Sbjct: 421 RALDYSLKRWAALSRYLDDGDVPIDNNWCENQIRPWALGRKNWLFAGSLRSGKRAAAIMS 480

Query: 470 LIQSARMNGHDPYAYLKDVLTRLPTQRASEIGQLLPHQWVP 510
           LIQSAR+NGHDPYAYLKDVLTRLPTQ AS+I QLLPHQW P
Sbjct: 481 LIQSARLNGHDPYAYLKDVLTRLPTQHASDIDQLLPHQWTP 521