Pairwise Alignments

Query, 621 a.a., putative Secretion protein from Pseudomonas putida KT2440

Subject, 561 a.a., pilus (MSHA type) biogenesis protein MshL (RefSeq) from Shewanella sp. ANA-3

 Score = 88.2 bits (217), Expect = 9e-22
 Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 26/287 (9%)

Query: 298 RDVFVDERLNTLTMRDTSDAVRMAEKLLQSQDQS-NPEVVLEVEVMEVATSRILDLGLQW 356
           R V V  +   +T+R   + +R     L S +     +V+LE +++EV  S     G+QW
Sbjct: 253 RQVVVTPQAGLVTIRAYPNELRQVRAFLNSAESHLQRQVILEAKILEVTLSDGYQQGIQW 312

Query: 357 PNT----------FGVLSDDGNPVSVLDQLKGINSSRISIAPAPQAKINAQDK--DINTL 404
            N           FG  +  G    +   L G+ S  I  +      I+  D   D++ L
Sbjct: 313 DNVLGHVGNTNINFGTSAGAGLSDKITASLGGVTSLSIKGSDF-NTMISLLDTQGDVDVL 371

Query: 405 ASPVIRVSNREQARIHIGQR---VPIISATSVPSTQGPVITESV--TYLDVGLKLEVQPT 459
           +SP +  SN ++A I +G     V  +S+T+V  T  PV T  V  T    G+ L+V P 
Sbjct: 372 SSPRVTASNNQKAVIKVGTDEYFVTDVSSTTVAGTT-PVTTPQVELTPFFSGIALDVTPQ 430

Query: 460 VHLNNEVAIKV---ALEVSNATPLEATRQGTIPV---QVDTRNAQTSLRLHDGETQVLAG 513
           +  +  V + V    ++V   T        ++ +   Q + R + T +R   G+  V+ G
Sbjct: 431 IDKDGNVLLHVHPSVIDVKEQTKDIKVSSESLELPLAQSEIRESDTVIRAASGDVVVIGG 490

Query: 514 LVRNDHNASGNKIPGLGDIPGLGRLFGSNKDDMSKSELVLAITPRIV 560
           L+++++    +++P LGDIP +G LF +      K+EL++ + P +V
Sbjct: 491 LMKSENTEVVSQVPLLGDIPLVGELFKNRSKQKKKTELIIMLKPTVV 537