Pairwise Alignments

Query, 569 a.a., putative ABC efflux transporter, permease/ATP-binding protein from Pseudomonas putida KT2440

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  256 bits (654), Expect = 2e-72
 Identities = 163/516 (31%), Positives = 279/516 (54%), Gaps = 11/516 (2%)

Query: 47  LVKTLIDEGLLAKDYQTLWHMAAIMIGAGLLGTVLAGVNRYLHTRLSGRILFALRDDLYR 106
           L+K L+DEG    +   L  +  +++G   +  +    + Y  + +SG ++  +R  L+ 
Sbjct: 47  LLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLSWVSGNVVMQMRRRLFN 106

Query: 107 HLQQLSPTFYGRRRIGDILSRLDGDVAEIQRFAVDSLFSAVSAVIGLVGAVTLMLMLSWQ 166
           H   +   F+ +   G +LSR+  D  ++      +L S V     ++G +TLM   SWQ
Sbjct: 107 HFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQ 166

Query: 167 LSLLLALLVPIEVLWLRWMRRKVEREVRNLRERSADVSSFLVETLPAMKFIQAAGQQGRE 226
           LSL+L ++ P+    + ++ ++  +  RN++     V+S   + L   K + + G Q  E
Sbjct: 167 LSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVE 226

Query: 227 AGRLDQLGQGYMRQLLKVQVTEFFTQAIPGTLTSWCRACAFLVGGWWVIQGTWQLGAL-I 285
             R D++     +Q +K+   +     +   + S        +     I+     G   +
Sbjct: 227 RKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTV 286

Query: 286 AFSTYMGMAVGPVQSLLGLYVAVQR-MAV--SLGRVMELKQEAVAVHQTANPQPIPDGPG 342
            FS   G+ + P+++L  +    QR MA   +L  +M+L+ E       A         G
Sbjct: 287 VFSAMFGL-MRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDNGKYEAERVN-----G 340

Query: 343 ELRLEALSFAHEGRQGAVLNNVQVSIPGGLKVAISGASGVGKSTLIDLLQRFYDPDAGRI 402
           E+ ++ ++F ++G++   L++V  SIP G  VA+ G SG GKST+ +L  RFYD D+G I
Sbjct: 341 EVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSI 400

Query: 403 LLDGVDLRDLDLAALRRRIAVVSQDIVLFRGTLAQNLAYGVP-EASRDELERVVRLARLD 461
            LDG D+RD  L  LRR  A+VSQ++ LF  T+A N+AY    E +R+++E+  R A   
Sbjct: 401 CLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAM 460

Query: 462 SLVDSLPLGLDGLLGERGQQLSGGQKQRIAIARAVLQAPAILVLDEATSAVDEATEREVI 521
             ++++P GLD ++GE G  LSGGQ+QR+AIARA+L+   +L+LDEATSA+D  +ER + 
Sbjct: 461 EFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLILDEATSALDTESERAIQ 520

Query: 522 AAIDQLFAGRTRILISHRASTLADADLQLQLHDGQL 557
           AA+D+L   +T ++I+HR ST+  AD  L + +G++
Sbjct: 521 AALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEI 556