Pairwise Alignments

Query, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

Subject, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

 Score =  225 bits (574), Expect = 3e-63
 Identities = 164/553 (29%), Positives = 270/553 (48%), Gaps = 33/553 (5%)

Query: 22  DAFDATVARFPDREALVVHHQALRYTWRQLADAVDQHARALMA-----LGVQPGDRLGIW 76
           + F+ +V ++ D+ A +  +     T+R+L    ++ +RA  A     L ++ GDR+ + 
Sbjct: 27  EMFEQSVHKYADQPAFM--NMGAVMTFRKL----EERSRAFAAYLQNDLKLKKGDRVALM 80

Query: 77  APNCAEWCITQFASAKVGAILVNINPAYRSSELDYALGQSGCRWVICADAFKTSDYHAML 136
            PN  ++ +  F   + G I VN+NP Y   EL++ L  +  R ++    F  +    + 
Sbjct: 81  MPNLLQYPVALFGVLRAGMIAVNVNPLYTPRELEHQLNDADARAIVIVSNFANTLEQIVA 140

Query: 137 QGLLPGLASSQPGALICERFPELRG-----VVSLALSPPPGFLAWHALQARAEVVSGEAL 191
              +  +  +  G ++    P  +G     VV       P +    A+  R  +  G  L
Sbjct: 141 NTQVKHVVLTSLGQML----PRAKGTIVDFVVKYVKGMVPKYDLPGAISMRKALHKGRRL 196

Query: 192 AARQAQLRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLG--LTEHDRLVVP- 248
              +  +  +D   +QYT GTTG  KGA L+H N++ N      + G  L E   LVV  
Sbjct: 197 QYVKPFMSGEDIAFLQYTGGTTGVAKGAILTHRNMVANVLQAKGAYGPVLQEGRELVVTA 256

Query: 249 VPLYHCFGMVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMFIAELDH 308
           +PLYH F + +  L  +  G   +  ++  D    ++ + +   TA+ GV T+F A +++
Sbjct: 257 LPLYHVFALTVNCLLFIEMGGRNLLITNPRDIPGFVKELQKYPFTAITGVNTLFNALVNN 316

Query: 309 PQRGEFDLSSLRTGI---MAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSPVSLQTGAA 365
               E D  +++  +   MA      E  ++  G +H+ E    YG+TE SP  L TG  
Sbjct: 317 EDFHELDFKNMKLAVGGGMAVQRAVAERWKKTTG-VHLLE---GYGLTECSP--LVTGNP 370

Query: 366 DDLERRVTSVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESID 425
            DL     ++G   P  E ++VD  GN VP  ++GEL  RG  VM GYW  P+AT E ++
Sbjct: 371 YDLTDYTGAIGLPVPSTEVRIVDDAGNVVPNDQVGELQVRGPQVMQGYWQRPEATKEVLN 430

Query: 426 AEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVP 485
           AEGW+ TGD+   D+QG + IV R KDMI+  G N+YP E+E+    H  V +V  IG  
Sbjct: 431 AEGWLSTGDIVKFDDQGLIHIVDRKKDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQA 490

Query: 486 CSKYGEEIVAWVRLHPGHAVSEVELREWARARIAHFKVPRYFRFVDEFPMTVTGKVQKFR 545
               GE +  +V +    ++++ E+    R  +  +KVP+   F D+ P T  GK+ +  
Sbjct: 491 NDVSGELVKIYV-VKRDPSLTKDEVIAHCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRV 549

Query: 546 MREISVEELKATA 558
           +RE +  +L A A
Sbjct: 550 LREENDAQLAAKA 562