Pairwise Alignments

Query, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

Subject, 547 a.a., cyclohexanecarboxylate-CoA ligase from Rhodopseudomonas palustris CGA009

 Score =  226 bits (575), Expect = 2e-63
 Identities = 172/544 (31%), Positives = 260/544 (47%), Gaps = 42/544 (7%)

Query: 20  IGDAFDATVARFPDREALVVHH----QALRYTWRQLADAVDQHARALMALGVQPGDRLGI 75
           I D  DA VA  PD+ AL           R+++R+LA   D+ A  L  LGV  GD + +
Sbjct: 26  INDDLDACVAHCPDKVALTAVRLDGGAVRRFSYRELATLADRVAVGLNRLGVGRGDVVAM 85

Query: 76  WAPNCAEWCITQFASAKVGAILVNINPAYRSSELDYALGQSGCRWVICADAFKTSDYHAM 135
             PN  ++ +   A +++GA+L  + P +R  EL + L     + ++   +F+  D+ AM
Sbjct: 86  QLPNWWQFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHGDAKVLVVPKSFRGFDHEAM 145

Query: 136 LQGLLPGLASSQPGALICERFPELRGVVSLALSPPPGFLA------WHALQARAEVVSGE 189
            + L P L             P LR +V +       F        W      A ++ G 
Sbjct: 146 ARSLQPDL-------------PALRTIVVVDGGGADDFDTLLTTPEWEKQPDAAAILQGS 192

Query: 190 ALAARQAQLRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLGLTEHDRLVVPV 249
             +        DD   + YTSGTTG PKG   S + ++ N     + L L E D +++  
Sbjct: 193 RPSP-------DDITQLIYTSGTTGEPKGVMHSANTLMANIVPYAQRLALRESDVILMAS 245

Query: 250 PLYHCFGMVMA-NLGCMTHGSALIYPSDAFDPLATLRAVAQEKATALYGVPTMFIAELDH 308
           P+ H  G +    +  M   SA++   D ++P      +  E+ T      T F+ +L  
Sbjct: 246 PMAHQTGFMYGLMMPIMLRASAVL--QDIWEPTKAAELIRTERVTFTMA-STPFLTDLTR 302

Query: 309 --PQRGEFDLSSLRTGIMAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSPVSLQTGAAD 366
              + GE  + SL+T + AGA  P  ++ +    +  A++  A+GMTE   V+L     D
Sbjct: 303 VVKESGE-PVPSLKTFLCAGAPIPGPLVEQAQAGLG-AKIVSAWGMTENGAVTL-IKLDD 359

Query: 367 DLERRVTSVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNPKATAESIDA 426
           D +   T+ G   P +E KV+D +G T+P  +IG L  R  S   GY   P       DA
Sbjct: 360 DDKLASTTDGCPLPGVEVKVIDGDGKTLPPNQIGRLVVRSCSNFGGYLKRPHWNGT--DA 417

Query: 427 EGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVADVQVIGVPC 486
           +GW  TGDLA M   GY+RI GRSKD+IIRGGENI   E+E   + HPAVA V ++  P 
Sbjct: 418 DGWFDTGDLAYMTADGYIRISGRSKDVIIRGGENIPVVEVEALLYKHPAVAQVAIVAYPD 477

Query: 487 SKYGEEIVAWVRLHPGHAVSEVELREWARA-RIAHFKVPRYFRFVDEFPMTVTGKVQKFR 545
            + GE   A V    G ++    + E+ +A ++A   +P      D  P T +GK+QKFR
Sbjct: 478 ERLGERACAVVVPKTGASIDFAAMVEFLKAQKLALQYIPERLVVRDAMPATPSGKIQKFR 537

Query: 546 MREI 549
           +RE+
Sbjct: 538 LREM 541