Pairwise Alignments

Query, 1042 a.a., Multidrug resistance protein MexB from Pseudomonas putida KT2440

Subject, 1048 a.a., multidrug-efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score = 1318 bits (3410), Expect = 0.0
 Identities = 673/1039 (64%), Positives = 819/1039 (78%), Gaps = 2/1039 (0%)

Query: 1    MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPNVAPPQVEIYAVYPGASAATMDES 60
            MP FFIDRP+FAWVVA+FI++AG +AIP LPV+QYP+VAPPQ+ I   YPGAS+    +S
Sbjct: 1    MPSFFIDRPIFAWVVAIFIMIAGIIAIPLLPVSQYPDVAPPQISINTNYPGASSQDTYQS 60

Query: 61   VVSLIEQELNGADNLLYFESQ-SSLGSATITATFAPGTHPDLAQVDVQNRLKVVESRLPR 119
            V  LIE ELNG + LLYFES  SS GS +I ATF PGT P  A VD+QNR++ VE RLP 
Sbjct: 61   VTRLIEDELNGVEGLLYFESSTSSSGSVSIDATFQPGTDPSQASVDIQNRVQRVEPRLPD 120

Query: 120  PVTQQGLQVEKVSTGFLLLATLTSEDGKLDETALSDILARNVMDEIRRLKGVGKAQLYGS 179
            PV QQG+QV++   GFLL+ +LTS DG +D   L D L+RNV+ EI+R+ GVG+AQL+ +
Sbjct: 121  PVRQQGVQVDEAGAGFLLIISLTSTDGSMDAIGLGDYLSRNVLSEIQRVPGVGRAQLFAT 180

Query: 180  ERAMRIWIDPRKLIGFNLTPNDVAEAIAAQNAQVAPGSIGDLPSRSTQEITANVVVKGQL 239
            ER+MR+W+DP K++G NLT  DV  AI AQNAQ+A GSIG  P+  TQ++TA VV+KGQL
Sbjct: 181  ERSMRVWLDPDKMLGLNLTAADVTAAIQAQNAQIASGSIGAQPNPITQQVTAPVVIKGQL 240

Query: 240  SSPDEFAAIVLRANPDGSTVTIGDVARVEIGAQEYQYGTRLNGKPATAFSVQLSPGANAM 299
            SSP+EF AIVLRAN DGS V + DVAR+EIG + Y + TRLNG P+ A +VQLSP  NAM
Sbjct: 241  SSPEEFGAIVLRANADGSAVRLRDVARLEIGGESYTFSTRLNGSPSAAIAVQLSPSGNAM 300

Query: 300  ETATLVRAKMQDLARYFPEGVKYDIPYDTSPFVKVSIEQVINTLFEAMLLVFAVMFLFLQ 359
             T+  ++A+M +LA +FPEG++Y IPYDTSPFV VSIE+V++TL EA+ LVF VMFLFLQ
Sbjct: 301  STSAAIKARMDELAEFFPEGLEYSIPYDTSPFVAVSIEKVLHTLVEAVGLVFLVMFLFLQ 360

Query: 360  NLRYTLIPTLVVPVALMGTFAVMLAMGFSVNVLTLFGMVLAIGILVDDAIVVVENVERIM 419
            N+RYT+IPT+VVPVAL+GT AVMLAMGFS+NVLT+FGMVLAIGILVDDAI+VVENVERIM
Sbjct: 361  NVRYTIIPTIVVPVALLGTCAVMLAMGFSINVLTMFGMVLAIGILVDDAIIVVENVERIM 420

Query: 420  AEEGLPPKQATRKAMGQISGAIVGITLVLVAVFLPMAFMQGSVGVIYQQFSLSMAVSILF 479
            +EEGL PK ATRKAM QI+GA++GITLVL +VF+PMAF  G+VGVIY+QFSL+M VSILF
Sbjct: 421  SEEGLTPKDATRKAMKQITGAVIGITLVLASVFIPMAFFPGAVGVIYRQFSLTMVVSILF 480

Query: 480  SAFLALSLTPALCATLLKPVAKGEHHERKGFFGWFNRRFESMSNGYQRWVVQALKRSGRY 539
            SA LALSLTPALCA+ LK V KG HH ++GFFGWFNR F+  S+GY R V   ++R+GR+
Sbjct: 481  SALLALSLTPALCASFLKQVPKGHHHAKRGFFGWFNRGFDRTSHGYTRAVGGIVRRTGRF 540

Query: 540  LLVYAVLLAVLGYGFSQLPTAFLPTEDQGYTITDIQLPPGASRMRTEQVAAQIEAHNAEE 599
            +++Y  LLA LG+ F QLP++FLP EDQG+ I  +QLP  A+  RT +V  Q E    +E
Sbjct: 541  MVIYLALLAGLGWAFLQLPSSFLPDEDQGFVIVMMQLPSEATANRTTEVIEQTETIFGQE 600

Query: 600  PGVGNTTLILGFSFSGSGQNAALAFTTLKDWSERGADDSAQSIADRATMAFTQLKDAIAY 659
              V     I GFSF GSGQNA LAF TLKDWSER AD+SAQSIA RATMA +Q+KDAI++
Sbjct: 601  KAVDTIVAINGFSFFGSGQNAGLAFVTLKDWSERDADNSAQSIAGRATMAMSQIKDAISF 660

Query: 660  SVLPPPIDGLGESTGFEFRLQDRGGMGHAELMAARDQLLESASKSKVLTNVREASLAESP 719
            ++ PP I GLG + GF FRLQDR G+G A L  ARDQLL+ AS+SKVLT VR   + ++ 
Sbjct: 661  ALSPPAIQGLGTTGGFSFRLQDRAGLGQAALAEARDQLLDLASQSKVLTGVRFEGMPDAA 720

Query: 720  QVQLEIDRRQANALGVSFADIGTVLDVAVGSSYVNDFPNQGRMQRVVVQAEGDQRSQVED 779
            QV + IDR +AN  GV+FADI + +   +GSSYVNDFPN GRMQRV VQA+  +R Q  D
Sbjct: 721  QVSVNIDREKANTFGVTFADINSTISTNLGSSYVNDFPNAGRMQRVTVQADETKRMQTAD 780

Query: 780  LLNIHVRNDSGKMVPLGAFVQARWVSGPVQLTRYNGYPAVSISGEPAAGYSSGEAMAEVE 839
            LLN++VRN +G MVPL AF    WV  P Q   YNGYPAV ISGE A GYSSG+A+AE+E
Sbjct: 781  LLNLNVRNSNGGMVPLSAFADVEWVKAPTQTVGYNGYPAVRISGEAAPGYSSGDAIAEME 840

Query: 840  RLVAQLPAGTGLEWTGLSLQERLSGSQAPLLMALSLLVVFLCLAALYESWSIPTAVLLVV 899
            RLVA+LPAG G EWTG SLQE  SGSQAPLL+ALS L+VFLCLAALYESWSIP +V++VV
Sbjct: 841  RLVAELPAGFGYEWTGQSLQEIQSGSQAPLLIALSCLLVFLCLAALYESWSIPVSVIMVV 900

Query: 900  PLGVLGAVLAVTLRGMPNDVFFKVGLITLIGLSAKNAILIIEFAKHLVDQGVDAADAAVQ 959
            PLGV+GAVLAVT+R MPNDV+FKVGLI +IGLSAKNAILIIEFAK L +QG    D+ ++
Sbjct: 901  PLGVIGAVLAVTMRDMPNDVYFKVGLIAIIGLSAKNAILIIEFAKELREQGKSLIDSTLE 960

Query: 960  AARLRLRPIVMTSLAFILGVVPLAIASGASSASQQAIGTGVIGGMLSAT-LAVVFVPVFF 1018
            AA LR RPI+MTSLAF LGV+PLAIA+GASS SQ+AIGTGV+GGM+SAT LA+ FVPVFF
Sbjct: 961  AAHLRFRPILMTSLAFTLGVLPLAIATGASSGSQRAIGTGVMGGMISATVLAIFFVPVFF 1020

Query: 1019 VVVMRLSGRRQAHDSDGQP 1037
            V VM++  R +A     +P
Sbjct: 1021 VFVMKIFERGRAAPEAAKP 1039