Pairwise Alignments

Query, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 407 a.a., multidrug efflux system protein from Sinorhizobium meliloti 1021

 Score =  332 bits (850), Expect = 2e-95
 Identities = 187/380 (49%), Positives = 251/380 (66%), Gaps = 6/380 (1%)

Query: 10  RPLALMALLS-LSLAGCSDSAEPDEQA---PTAQVRVETLQLQPLAISSELSGRILAPRT 65
           RP+   AL S + LAGC  + E    A   P + V V T + +PL I++EL GRI A R 
Sbjct: 9   RPILAAALASVIFLAGCQKNEEQQAAAAAPPPSPVAVFTTKAEPLPITNELPGRITATRI 68

Query: 66  AEVRARVAGVVLKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQARLQ 125
           AEVR R++G+V++RV+ +G+ VK+GDVL+ IDPAPF+   DSA ATL +A+A   QA+  
Sbjct: 69  AEVRPRISGIVVERVFEQGTMVKEGDVLYRIDPAPFQVKVDSAEATLKRAQAVVDQAKRT 128

Query: 126 EQRYRELVDDKAVSRQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISGRIG 185
             R   L + +  + Q+YD+A A+  QA+A+V  A A L  A+LNL Y  VTAPISGRIG
Sbjct: 129 ADRQSRLKEAQVTAVQQYDDAIAALAQAEADVGIAEAGLAEAKLNLQYTNVTAPISGRIG 188

Query: 186 RAQVTEGALVGQNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQARA 245
           RA +TEGALV  N+   LATIQQLDPI+AD TQS  +L  LR+AL+ G+       +A  
Sbjct: 189 RALITEGALVNTNDPQNLATIQQLDPIYADFTQSATDLIRLRKALKDGQWMS-AKNEAEV 247

Query: 246 TLIQDDGSAYPLPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAVQPK 305
            LI DDG+ Y L G+LLFS+ +VD +T Q+TLR EFPNP+ DLLPG YVRV+++Q ++  
Sbjct: 248 QLILDDGTPYALKGRLLFSEAAVDATTGQVTLRGEFPNPNNDLLPGMYVRVQIQQGLEKD 307

Query: 306 GLSVPQRAILRDSAGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGERVVVEGL 365
            ++VPQ+A+ R++AG  +V VV+   +V  R V LG   G+RW V+ GL  GE+V+VEG 
Sbjct: 308 AITVPQQAVQRNNAGQSQVYVVNADNKVEFRNVTLGRTVGERWQVTSGLKPGEKVIVEGF 367

Query: 366 QHVKAGDQVQ-VDNTPAAPP 384
           Q V  G  VQ  D  P A P
Sbjct: 368 QKVGPGAPVQPSDWDPNAKP 387