Pairwise Alignments

Query, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 405 a.a., efflux RND transporter periplasmic adaptor subunit from Rhodopseudomonas palustris CGA009

 Score =  285 bits (729), Expect = 2e-81
 Identities = 164/378 (43%), Positives = 245/378 (64%), Gaps = 13/378 (3%)

Query: 13  ALMAL-LSLSLAGCSDSAEPDEQAPTA-----QVRVETLQLQPLAISSELSGRILAPRTA 66
           A+ AL  +++LAGC   ++ D  A +A     ++ + TL+ Q +AI++EL GR++A +TA
Sbjct: 9   AIAALAFAVALAGCKPHSD-DHGADSAGVDRPELGIVTLRPQAVAITAELPGRVVASQTA 67

Query: 67  EVRARVAGVVLKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQARLQE 126
           EVR +V+G+V +R++ EGS+V +G  L+ IDPAP+KA +DSA A L KAEA    A+ + 
Sbjct: 68  EVRPQVSGIVQQRLFTEGSEVAEGASLYQIDPAPYKAAYDSAVAALRKAEAAVPSAQAKS 127

Query: 127 QRYRELVDDKAVSRQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISGRIGR 186
           +RY+ LV   AVS+Q++D+A A+  QA AEVA A+AA+E AR+NL Y T+ API GR  R
Sbjct: 128 ERYQGLVKQNAVSKQDFDDAVAALAQAKAEVATAKAAVETARINLDYTTIKAPIGGRTDR 187

Query: 187 AQVTEGALVGQNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQARAT 246
           + +T GALV   +T  L TI+ LDPI  DV QS+  L  LR+A+ +G L+  G   A   
Sbjct: 188 SSLTPGALVTAGQTGLLTTIRTLDPIFVDVIQSSTNLLNLRQAIDSGRLKVSGPHVA-VK 246

Query: 247 LIQDDGSAYPLPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAVQPKG 306
           L  ++G+ YPL GK+ FS+ +V  ST  +TLR+ FPNP   LLPG Y R  +E+ V P  
Sbjct: 247 LKLENGAIYPLAGKMEFSEANVSTSTGTVTLRAVFPNPRRLLLPGMYARAVVEEGVAPDS 306

Query: 307 LSVPQRAILRDSAGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGERVVVEGLQ 366
             VPQRA+ R++ G    + +D+  +  +R + +  + G+ W++  G+  G+RV+VEG Q
Sbjct: 307 FLVPQRAVTRNTKGEAVAMFLDKDGKAEERVLSVIRSVGNNWLIGAGVHDGDRVIVEGTQ 366

Query: 367 HVK-----AGDQVQVDNT 379
           +V+     AG +V VD+T
Sbjct: 367 YVRPGQIAAGTEVVVDDT 384