Pairwise Alignments

Query, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 386 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  280 bits (716), Expect = 5e-80
 Identities = 153/366 (41%), Positives = 233/366 (63%), Gaps = 5/366 (1%)

Query: 7   PCLRPLALMALLSLSLAGCSDSAEPDEQAPTAQVRVETLQLQPLAISSELSGRILAPRTA 66
           P LRPL L++L +L+LA C    EP ++ P   V    ++ +P+ +  EL GR+ A RTA
Sbjct: 6   PQLRPL-LVSLFALTLAACG-GGEPPQEMPPPIVSTIVVETRPVHLEDELPGRVSALRTA 63

Query: 67  EVRARVAGVVLKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQARLQE 126
           E+R +V G+VL+R++ +G++V+ G  LF I+PAPFKA+ DSA + L +A A   +A+LQ 
Sbjct: 64  EIRPQVGGIVLRRLFEQGAEVQAGQPLFQINPAPFKAEVDSAASALKRAVAAMERAKLQV 123

Query: 127 QRYRELVDDKAVSRQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISGRIGR 186
            R + LV+  AVS+Q +D+A + + Q+ A+VA+A+AAL R +L+L +AT+ +PI+GRIG 
Sbjct: 124 DRLKPLVNADAVSQQLFDDALSQYNQSSADVAQAKAALARRQLDLDFATIRSPIAGRIGE 183

Query: 187 AQVTEGALVGQNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQ-ARA 245
             VTEGALVGQ++  P+A +QQ+D ++ DV Q    L A+R++  AG+      G+    
Sbjct: 184 ELVTEGALVGQSDANPMARVQQIDQVYVDVRQPASMLEAIRKS--AGQSASSDGGKDGNV 241

Query: 246 TLIQDDGSAYPLPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAVQPK 305
            ++   G+ YP+ G +LFS I+VD  T  + +R    NP+  LLPG +VR R+ Q    +
Sbjct: 242 KILDAQGNPYPVSGHILFSGINVDAGTGDVVIRIRVNNPERHLLPGMFVRARVPQGGDIQ 301

Query: 306 GLSVPQRAILRDSAGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGERVVVEGL 365
           GL VPQ+ + R S G  +V VV Q  +   + V LG     +++V  GLAAGERV+VEG 
Sbjct: 302 GLLVPQQVVSRSSTGQARVWVVGQDGKAGVKNVELGKLVERQYLVRSGLAAGERVIVEGQ 361

Query: 366 QHVKAG 371
             ++ G
Sbjct: 362 DRLQPG 367