Pairwise Alignments

Query, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 419 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  201 bits (512), Expect = 2e-56
 Identities = 140/384 (36%), Positives = 210/384 (54%), Gaps = 37/384 (9%)

Query: 9   LRPLALMALLSLSLAGCS-DSAEPDEQAPTAQVRVETLQLQP--LAISSELSGRILAPRT 65
           LRP A   +L+L LA CS ++A P   AP A + V  L++QP  L  S EL  +    + 
Sbjct: 14  LRPAAAALVLALGLAACSGENAAPQGGAPQA-LPVTVLEMQPQNLPASLELMAQTEGAKE 72

Query: 66  AEVRARVAGVVLKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQARLQ 125
            EVRARV G+++KR+Y+EG+ VK G  LF ID AP++         LA+A+A   Q   +
Sbjct: 73  TEVRARVGGILMKRLYQEGALVKAGQPLFQIDRAPYE-------IALAEAKAKAEQTARE 125

Query: 126 EQRYRELVDDKAVSRQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISGRIG 185
           E R + L+  +AVS++EYD+A ++        A A+AAL +A+LNL + TVTAP+SG  G
Sbjct: 126 EGRLKGLLARQAVSQKEYDDAASN-------NAIAQAALRQAQLNLSWTTVTAPVSGTSG 178

Query: 186 RAQVTEGALVGQNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQARA 245
           RA  +EG L+  ++ + L ++ Q +P+             +R  L   +   +  GQ +A
Sbjct: 179 RAVKSEGNLINTSDASLLTSVYQANPMW------------VRFGLSESDTANLPGGQLKA 226

Query: 246 ------TLIQDDGSAYPLPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLE 299
                  LI  DGS Y  PGK+ F   ++D +     LR+EF N D  LLPG +VRVRL 
Sbjct: 227 EMVSGVELILPDGSVYDKPGKINFLASTIDTTLGTQQLRAEFDNSDGKLLPGQFVRVRLL 286

Query: 300 QAVQPKGLSVPQRAILRDSAGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGER 359
              +     VPQ A+++ +     V+VVD  ++V+ R V     +G  W+++ GL AG++
Sbjct: 287 TGNREGVFLVPQAAVMQ-TEQARLVMVVDAESKVAPRPVQTAEWRGKDWVITGGLKAGDK 345

Query: 360 VVVEGLQHVKAGDQVQVDNTPAAP 383
           V+V+ L   + G  V      AAP
Sbjct: 346 VIVDNLMKARPGAPVAPHGPQAAP 369