Pairwise Alignments

Query, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 379 a.a., MexX family efflux pump subunit from Klebsiella michiganensis M5al

 Score =  301 bits (772), Expect = 2e-86
 Identities = 165/379 (43%), Positives = 237/379 (62%), Gaps = 7/379 (1%)

Query: 5   LSPCLRPLALMALL--SLSLAGCSDSAEPDEQAPTAQVRVETLQLQPLAISSELSGRILA 62
           ++P +R   L +L+  ++ L+GC +S +    A   QV V  +   PL++++EL GR  A
Sbjct: 1   MTPHVRVTLLSSLIISAILLSGCDNSGDGQPHAQIPQVSVYVVHSAPLSVTTELPGRTSA 60

Query: 63  PRTAEVRARVAGVVLKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQA 122
            R AEVR +V G++L+R + EGSDV  G  L+ IDPA ++A ++S +   AKAEA    A
Sbjct: 61  YRVAEVRPQVNGIILQRNFVEGSDVSAGQSLYQIDPATYQAAYNSTKGDEAKAEAAAAIA 120

Query: 123 RLQEQRYRELVDDKAVSRQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISG 182
            L  +RY  L+  K +S+QEYD A A+  QADA+V  A+AA+E AR+NL Y  VT+PISG
Sbjct: 121 HLTVKRYAPLLGTKYISQQEYDQAVATARQADADVIAAKAAVESARINLAYTKVTSPISG 180

Query: 183 RIGRAQVTEGALVGQNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQ 242
           RIG++ VTEGALV   +   +AT+QQLDPI+ DVT+S+ +   L++     E  Q G+  
Sbjct: 181 RIGKSSVTEGALVTNGQADAMATVQQLDPIYVDVTESSNDFMRLKQ-----ESLQHGNDT 235

Query: 243 ARATLIQDDGSAYPLPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAV 302
               LI ++G  Y L G L FSD++VD ST  ITLR+ FPNP   LLPG +VR R+++ V
Sbjct: 236 KNVQLIMENGQPYTLQGALQFSDVTVDESTGSITLRAIFPNPQHALLPGMFVRARIDEGV 295

Query: 303 QPKGLSVPQRAILRDSAGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGERVVV 362
            P  + VPQ+ + R   G   V++V+   +V  R V    A GD+W+V+ GL AGE+V+V
Sbjct: 296 SPNAILVPQQGVTRTPRGEASVMLVNDKNQVETRAVTAAQAIGDKWLVTSGLKAGEKVIV 355

Query: 363 EGLQHVKAGDQVQVDNTPA 381
            GLQ V+ G  V+ +   A
Sbjct: 356 SGLQKVRPGVTVKAEEDTA 374