Pairwise Alignments

Query, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 423 a.a., efflux RND transporter periplasmic adaptor subunit from Ralstonia sp. UNC404CL21Col

 Score =  348 bits (894), Expect = e-100
 Identities = 189/367 (51%), Positives = 254/367 (69%), Gaps = 4/367 (1%)

Query: 12  LALMALLSLSLAGCSDSAEPDEQA---PTAQVRVETLQLQPLAISSELSGRILAPRTAEV 68
           LA  A + ++LA C +           P  +V V T+Q   + ++SEL GR+ A R A+V
Sbjct: 10  LAAAAFMVVALAACGNKQAQGPGGAGMPPTEVGVVTVQPHSVGLTSELPGRLEATRVAQV 69

Query: 69  RARVAGVVLKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQARLQEQR 128
           RARVAG+VLKR Y EGSDVK G  LF IDPA ++A  DSA+A LA++EAT+ QA+L+ +R
Sbjct: 70  RARVAGIVLKRTYAEGSDVKAGQQLFQIDPAQYQASLDSAKAQLARSEATQTQAQLKAER 129

Query: 129 YRELVDDKAVSRQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISGRIGRAQ 188
           Y+ LV   A+S+Q+YD+A A+  QA A+VA ARAA+E A+LN+GYA+VT+PISGR G AQ
Sbjct: 130 YKPLVATNAISKQDYDDATAAAKQATADVAAARAAVETAKLNVGYASVTSPISGRAGLAQ 189

Query: 189 VTEGALVGQNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQARATLI 248
           VTEGALVGQ E T L T+QQ+DPI+   TQS+ E+  L++AL+ G+L + G   A+ TL+
Sbjct: 190 VTEGALVGQGEATLLTTVQQIDPIYLTFTQSSTEVMRLQQALKDGKLAKAGGDAAKVTLV 249

Query: 249 QDDGSAYPLPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAVQPKGLS 308
            +DG AY   GKL FSD++VDP+T  ITLR+  PN D  LLPG YVR RLEQAV  + ++
Sbjct: 250 TEDGRAYAQSGKLYFSDLTVDPATGTITLRAIVPNADRTLLPGMYVRARLEQAVDEQAIT 309

Query: 309 VPQRAILRDSAGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGERVVVEGLQHV 368
           VPQ+A+ R   G   V+VVD+    + RQV    + G  WIVS GL AG++V+V+GLQ V
Sbjct: 310 VPQQAVTRSPDGA-SVMVVDEKGMAAVRQVQADRSTGTEWIVSSGLKAGDKVIVDGLQKV 368

Query: 369 KAGDQVQ 375
           + G  V+
Sbjct: 369 RPGAPVK 375