Pairwise Alignments

Query, 233 a.a., putative transcriptional regulatory protein from Pseudomonas putida KT2440

Subject, 257 a.a., two component transcriptional regulator, winged helix family from Synechococcus elongatus PCC 7942

 Score =  165 bits (417), Expect = 9e-46
 Identities = 95/230 (41%), Positives = 140/230 (60%), Gaps = 10/230 (4%)

Query: 4   IFLVEDDSALSELIASYLQRNDFHVQVIARGDHVLDEYRR---------QRPDLVILDLM 54
           I +VED++ + +++A  LQ+  F V V A G   L+ +R          + PDLV+LDLM
Sbjct: 26  ILVVEDEAVIRDMVALVLQQEGFTVDVAADGRTALNYFRSDSPEAGSVTENPDLVVLDLM 85

Query: 55  LPGIDGLQLCRLLRQESQTLPILMLTARDDSHDQVLGLEMGADDYVTKPCEPRVLLARVR 114
           LP ++GL  CRLLR++  T+PILML+A+D   D+V+GLE+GADDY+TKP   R L+AR R
Sbjct: 86  LPAVNGLDFCRLLRRQGVTVPILMLSAKDTETDRVVGLEIGADDYLTKPFGTRELVARCR 145

Query: 115 TLLRRSSVNEPRLDNDLILIGGLRIDLAERTVSWRGEEVELSSGEYNLLVVLARNAGEVM 174
            LLRRS  N+P     ++   GL++   E  V     E+ LS  E+ LL +  R+   V 
Sbjct: 146 ALLRRSQ-NQPAETPAVLRYEGLKLFPEECRVLLDDRELTLSPKEFRLLELFMRHPRRVW 204

Query: 175 NRDRILQQLRGIEFNGTDRSVDVAISKLRRKFDDNAGEARKIKTVWGKGY 224
           +RD++L+++ GI+F G  +++DV I  LR K + N      + TV G GY
Sbjct: 205 SRDQLLEKIWGIDFMGDSKTIDVHIRWLREKIEANPSNPSYLLTVRGFGY 254