Pairwise Alignments

Query, 282 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 277 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  100 bits (248), Expect = 5e-26
 Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 16/241 (6%)

Query: 29  YAAHSHESFSIGVITGGRSTYINSDQCVEVGAGTTVLMNPGVVHTCNPVAGEPWSYLMLF 88
           ++ HSHE +++GVI  G  ++  +         + +L+N   VHT +      W+Y  ++
Sbjct: 36  FSRHSHEGYTVGVIERGAQSFYRTGGNHIAPQDSIILVNADEVHTGHSAVEGGWAYKAMY 95

Query: 89  VDQPWLQAVGFTLPTQTWSR--------SPVLYRRLLQAFADLFDARLPDREARLAALFH 140
                   V   +   T +          P L  +L   F  L   +  +R  R   ++ 
Sbjct: 96  PLPEQFATVAKEIGANTGAPYFPQAVVYDPELASQLRLVFETL--EKSTNRLLRETLIYA 153

Query: 141 ELPGMLGGNASEGGEGNPRLDA------AAAFIRAHRSDPLSLEDICGACGLSRSYLIRA 194
            L  ++  +     + +  L A         F+       +SLE++    GLS  +L+R 
Sbjct: 154 SLVKLMTRHGRTAPQADQPLSALRPLLLVKEFLDDFPQADVSLEELAQLAGLSPFHLVRT 213

Query: 195 FRQRFGLTPHGYLLDQRVQLARAQLRQGRSIAEVAQEAGFADQAHLQRAFKQHLAATPGH 254
           F+++FGL PH Y +  R++LA+  L+QG SI+E AQE GF DQ+HL R FK+ L  TP  
Sbjct: 214 FQKQFGLPPHAYQIQARLRLAKTLLKQGVSISETAQECGFHDQSHLHRHFKKALGITPKQ 273

Query: 255 Y 255
           Y
Sbjct: 274 Y 274