Pairwise Alignments

Query, 295 a.a., chloramphenicol-sensitive protein from Pseudomonas putida KT2440

Subject, 297 a.a., chloramphenicol resistance permease RarD from Klebsiella michiganensis M5al

 Score =  120 bits (302), Expect = 3e-32
 Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 13/295 (4%)

Query: 4   GIVSSVMASCLFAVMYFYTSLLKPLDGEEIFGWRTLLTLPCLTLFMLVSKDWKRVGELMG 63
           G++ ++ A  ++ +   Y  L+  +  +EI   R + +   +   + VS+ W +V  L+ 
Sbjct: 9   GVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVALISVSRQWPQVKRLLK 68

Query: 64  RVKRTPVLLLG--MVGTSWLMGVQLWLFLWAPLHGRSLEVSMGYFLLPLAMVLTGRLVYG 121
             K+  +L L   +VG +WL      LF+WA  +   LE S+GYF+ PL  +L G +  G
Sbjct: 69  TPKKVLLLALSAVLVGGNWL------LFIWAVNNHHMLEASLGYFINPLVNILLGMIFLG 122

Query: 122 ERLSRLQTVAVACAALGVGHELYQNGSFAWETLLVTIGYPVYFVLRRRCRTDNLGGLWCD 181
           ER  R+Q +AV  AA GV  +L+  GS     L +   +  Y +LR++   D   G+  +
Sbjct: 123 ERFRRMQWLAVLLAACGVLVQLWTFGSLPIIALGLAFSFAFYGLLRKKIAVDAQTGMLFE 182

Query: 182 MCLLLPWA---LYFVIQSPLSSADLQAHPGLYVLVPILGAISASALIAYVLASRMLPFSL 238
              LLP A   L+ +  SP S    Q    L +L+   G ++   L+ +  A+  L  S 
Sbjct: 183 TLWLLPVAAIYLFGIADSPTSHMG-QNPWSLNLLLMAAGVVTTIPLLCFTGAATRLRLST 241

Query: 239 FGLLSYVEPVLLVGVAL-LLGETIGPDQWLTYLPIWAAVLVLVLEGFKHLLRQRR 292
            G   Y+ P L+  +A+   GE  G D+ +T+  IW A+ + V++    + R RR
Sbjct: 242 LGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTIRRTRR 296