Pairwise Alignments

Query, 351 a.a., conserved protein of unknown function containing tetratricopeptide repeat domain from Pseudomonas putida KT2440

Subject, 923 a.a., TPR repeat from Synechococcus elongatus PCC 7942

 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 35/130 (26%), Positives = 58/130 (44%)

Query: 155 GPLQSALEQYQQALEQQPEDADAQVHLARLYLHENDYTHAAAALQRALAVAPGNLDALAT 214
           G  ++A+ Q  + L   P+ A A       Y   +        L+RA+A+ P +      
Sbjct: 21  GEFEAAIAQLDRLLGDVPDWAAALGLQGLCYYCCDQKETGITLLRRAIALDPTDPTHFNN 80

Query: 215 QVRLLERQGHHDASRQVLGKALALSPDSAFLQYELGLWLKRHEQREYALLALSRAVELDP 274
              LL+RQGH   + + L +ALA+ P     ++   + L++      AL    + +E DP
Sbjct: 81  LGNLLQRQGHLTEALERLTQALAIDPTHVAARFNRAITLQKLGDPATALQDYQQLLEADP 140

Query: 275 DNADYRYTLA 284
           DN + RY  A
Sbjct: 141 DNPEIRYNSA 150



 Score = 42.0 bits (97), Expect = 6e-08
 Identities = 34/125 (27%), Positives = 52/125 (41%)

Query: 190 DYTHAAAALQRALAVAPGNLDALATQVRLLERQGHHDASRQVLGKALALSPDSAFLQYEL 249
           ++  A A L R L   P    AL  Q          +    +L +A+AL P        L
Sbjct: 22  EFEAAIAQLDRLLGDVPDWAAALGLQGLCYYCCDQKETGITLLRRAIALDPTDPTHFNNL 81

Query: 250 GLWLKRHEQREYALLALSRAVELDPDNADYRYTLAVTLHELDQLDAAQKQLETVLNRQPA 309
           G  L+R      AL  L++A+ +DP +   R+  A+TL +L     A +  + +L   P 
Sbjct: 82  GNLLQRQGHLTEALERLTQALAIDPTHVAARFNRAITLQKLGDPATALQDYQQLLEADPD 141

Query: 310 NRRAR 314
           N   R
Sbjct: 142 NPEIR 146



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 157 LQSALEQYQQALEQQPEDADAQVHLA-------RLYLHENDYTHAAAALQRALAVAPGNL 209
           LQ+AL ++Q A   Q  D   ++ +A       R +  +N +  A   +++A+A+AP   
Sbjct: 444 LQTALAEFQPA--PQHWDYRGELSIADWIQAADRAFTAQN-WPRAEWLIRQAVAIAPEEP 500

Query: 210 DALATQVRLLERQGHHDASRQVLGKALALSPDSAFLQYELGLWLKRHEQREYALLALSRA 269
                  R L++QG +  + Q L  A  L+P  A   +E         Q   AL +L++A
Sbjct: 501 SFHRALGRSLKQQGDYAGAAQALAIACELAPTQAEFWHERSSLEYYDNQLTAALNSLNQA 560

Query: 270 VELDPDNADYRYTLAVTLHELDQ 292
           + L    AD+  +  V  + L Q
Sbjct: 561 IALQGATADHLISRGVLHYRLGQ 583



 Score = 33.5 bits (75), Expect = 2e-05
 Identities = 31/126 (24%), Positives = 50/126 (39%)

Query: 223 GHHDASRQVLGKALALSPDSAFLQYELGLWLKRHEQREYALLALSRAVELDPDNADYRYT 282
           G  +A+   L + L   PD A      GL     +Q+E  +  L RA+ LDP +  +   
Sbjct: 21  GEFEAAIAQLDRLLGDVPDWAAALGLQGLCYYCCDQKETGITLLRRAIALDPTDPTHFNN 80

Query: 283 LAVTLHELDQLDAAQKQLETVLNRQPANRRARVLLIQYWKESGQLQNVQVSLAELERQNP 342
           L   L     L  A ++L   L   P +  AR       ++ G          +L   +P
Sbjct: 81  LGNLLQRQGHLTEALERLTQALAIDPTHVAARFNRAITLQKLGDPATALQDYQQLLEADP 140

Query: 343 DDPALQ 348
           D+P ++
Sbjct: 141 DNPEIR 146