Pairwise Alignments

Query, 1059 a.a., Multidrug efflux RND transporter MexF from Pseudomonas putida KT2440

Subject, 1061 a.a., multidrug-efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score = 1370 bits (3547), Expect = 0.0
 Identities = 682/1039 (65%), Positives = 843/1039 (81%), Gaps = 1/1039 (0%)

Query: 1    MNFSKFFITRPIFAAVLSLVLLIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG 60
            MNFS+FF+ RP+FA VLS+++ +AG I +  LPISEYPEVVPP +VVRA +PGANP VI 
Sbjct: 1    MNFSRFFVDRPVFAGVLSVIIFVAGLIGMTGLPISEYPEVVPPQIVVRAQYPGANPAVIA 60

Query: 61   ETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKL 120
            ETVA PLE+ I GVE MLYM SQ+TADG +TLT+TF LGTD D AQ  VQNRV++ +P+L
Sbjct: 61   ETVATPLEEQINGVEGMLYMQSQATADGLMTLTVTFELGTDPDQAQQLVQNRVSQGEPRL 120

Query: 121  PEEVTRIGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAILNIKDELARLGGVGDVQLF 180
            PEEV R+G+T  K+SPDLT+VVHL SP+ +YD+ YL NY +LN+KD LAR+ GVG VQ+F
Sbjct: 121  PEEVRRLGVTTVKSSPDLTLVVHLISPNGQYDINYLRNYGVLNVKDRLARVDGVGQVQIF 180

Query: 181  GMGDYSLRVWLDPNKTASRNLTASDVVAAIREQNRQVAAGQLGAPPAPGSTSFQLSINTQ 240
            G GDYS+RVW+DP K A R L ASD+  A+R QN Q AAG +GA P+      QLS+N Q
Sbjct: 181  GGGDYSMRVWIDPEKAAERGLAASDIANAVRGQNVQAAAGVIGASPSVPGLDLQLSVNAQ 240

Query: 241  GRLVNEEEFENIIIRAGADGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS 300
            GRL   E+F +I++++G  GEITRL D+ARVE+G++ Y+LRSLL+N+ AV + +FQ PGS
Sbjct: 241  GRLKTPEDFADIVVKSGESGEITRLGDVARVEMGAADYSLRSLLDNKAAVGMGVFQAPGS 300

Query: 301  NAIEISDEVRAKMAELKKDFPEGMDYSIVYDPTIFVRGSIEAVVHTLFEALVLVVLVVIL 360
            NAI+IS+ V   MAELK+  P+G+DY IVYD T FVR SIE+V+HTL EA+ LVV+VVI+
Sbjct: 301  NAIQISENVHKVMAELKQTMPDGVDYEIVYDTTQFVRASIESVIHTLLEAIALVVVVVIV 360

Query: 361  FLQTWRASIIPLLAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE 420
            FLQTWRASIIPL+AVPVS++GTFAVM++FGFS+NALSLFGLVLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQTWRASIIPLVAVPVSIVGTFAVMYVFGFSINALSLFGLVLAIGIVVDDAIVVVENVE 420

Query: 421  RNIGLGLKPLEATQKAMSEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAIST 480
            RNI  GL P++AT +AM EV+GPIIA ALVL AVFVP AFI+GLTGQFY+QFALTIAIST
Sbjct: 421  RNISQGLSPVQATYRAMQEVSGPIIAIALVLVAVFVPLAFITGLTGQFYRQFALTIAIST 480

Query: 481  VISAFNSLTLSPALAAVLLKDHHAPKDRFSRFLDKLLGSWLFSPFNRFFDRASHSYVGGV 540
            VISA NSLTLSPALAA+LLKDHHAPKDR +R +D L G W F  FNRFF  +S +Y  GV
Sbjct: 481  VISALNSLTLSPALAALLLKDHHAPKDRLTRVMDGLFG-WFFRGFNRFFGASSEAYGRGV 539

Query: 541  RRVIRSSGIALFVYAGLMGLTYLGFSSTPTGFVPAQDKQYLVAFAQLPDAASLDRTEAVI 600
              ++    + + VY  L+G+T++ F + P GFVPAQDKQYL+ FAQLPDAA+LDR+E VI
Sbjct: 540  GGILTRKSLVMGVYVVLLGVTFVLFRAVPGGFVPAQDKQYLIGFAQLPDAATLDRSEDVI 599

Query: 601  KRMSEIALKQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAAAIAAAL 660
            +RMSEIALK PGV  ++AFPGLSINGFTNS NSGIVF  LKPF+ER  P  S  AIA  L
Sbjct: 600  RRMSEIALKHPGVEHAIAFPGLSINGFTNSSNSGIVFVSLKPFEERTTPELSGGAIAMQL 659

Query: 661  NAQFADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNLGYEALYKETQNIIAKSHNVPE 720
            N +F  IQDA+IA+FPPPPVQGLGT GGF+LQIEDR  LGY  L   T+ ++AK+   PE
Sbjct: 660  NQEFGAIQDAFIAMFPPPPVQGLGTTGGFKLQIEDRNGLGYRTLDDATKAVLAKAMAAPE 719

Query: 721  LAGLFTSYQVNVPQVDAAIDREKAKTHGVAITDIFDTLQVYLGSLYTNDFNRFGRTYQVN 780
            LAGL++S+Q+NVPQ+ A +DR KA+  GVA+TD+F+TLQ+YLGSLY NDFN FGRTY V 
Sbjct: 720  LAGLYSSFQINVPQLYADLDRTKARQLGVAVTDVFETLQIYLGSLYVNDFNAFGRTYSVR 779

Query: 781  VQAEQQFRLDAEQIGQLKVRNNLGEMIPLATFLKVSDTSGPDRVMHYNGFITAEINGAAA 840
            +QA+  +R  A+ IG+LKVR+  GEMIPL+  L V  T G +R + YNGF+ A+ING  A
Sbjct: 780  IQADASYRSHADDIGKLKVRSQTGEMIPLSALLNVEQTVGAERAIRYNGFLAADINGGPA 839

Query: 841  PGYSSGQAEAAIEKLLKEELPNGMTFEWTDLTYQQILSGNTALLVFPLCVLLAFLVLAAQ 900
            PG+SSGQA+AAIE++  E LP G+++EWTDLTYQQIL+GN+ +LVFPL +LL +LVLAAQ
Sbjct: 840  PGFSSGQAQAAIERIAAETLPPGISYEWTDLTYQQILAGNSGILVFPLALLLVYLVLAAQ 899

Query: 901  YESWSLPLAVILIVPMTLLSAITGVIVSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD 960
            YES  LP+A+ILIVPM +++A+TGV ++GGDNN+FTQIGLIVLVGL+ KNAILIVEFA++
Sbjct: 900  YESLLLPIAIILIVPMGIMAALTGVWLTGGDNNVFTQIGLIVLVGLSAKNAILIVEFARE 959

Query: 961  EQAKGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVFSSGAGSEMRHAMGVAVFSGMI 1020
             +  G + ++A +EA RLRLRPILMTS+AFIMGVVPLV S+GAG+EMR AMGVAVF+GMI
Sbjct: 960  LELSGSNAVSAAIEASRLRLRPILMTSMAFIMGVVPLVTSTGAGAEMRSAMGVAVFAGMI 1019

Query: 1021 GVTVFGLFLTPVFFFLIRR 1039
            GVT FG+F+TPVF+ LIR+
Sbjct: 1020 GVTAFGIFMTPVFYVLIRK 1038