Pairwise Alignments

Query, 475 a.a., Sigma-54 dependent transcriptional regulator/response regulator from Pseudomonas putida KT2440

Subject, 448 a.a., alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas fluorescens FW300-N2E2

 Score =  281 bits (719), Expect = 3e-80
 Identities = 175/463 (37%), Positives = 254/463 (54%), Gaps = 32/463 (6%)

Query: 5   ILVVEDDEILADNIRTYLSLKGYEVIVCHSAELALEQIKRAQPDAVLTDNSLPGMSGHDL 64
           IL+V+D+  +    R  L  +GY V   +SA  A   ++R   D    D  L   +G D+
Sbjct: 11  ILLVDDESAILRTFRYCLEDEGYSVATANSAAQADALLQRQVFDLCFLDLRLGEDNGLDV 70

Query: 65  LRTLVAQAPDLKVIMMTGYGNVEDAVQAMKEGAFHYLTKPVVLAELKLTLDKALATERME 124
           L  +  QAP ++V+++T +  V+ AV A++ GA  YL KP    +L+L   K L   ++ 
Sbjct: 71  LAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLATAKQLEVRQLS 130

Query: 125 RTLSFYQ-EREAQKSGLQALIGESPVMLTLKHTLRQVLDAERRMASDDLPPVLIEGETGT 183
             L   + E    K GL +    SP M  +  T RQV   +          +LI GE+GT
Sbjct: 131 ARLEALEGEVRKPKDGLDS---HSPAMKVVLETARQVASTDAN--------ILILGESGT 179

Query: 184 GKELVARALHFDGSRSKGPFIEFNCASIPANLLEAELFGHEKGAFTDAKERRVGLVEAAD 243
           GK  +A+A+H    R+K   +  NC S+ A L+E+ELFGH +GAFT A E  +G V  AD
Sbjct: 180 GKGELAQAIHGWSKRAKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQAD 239

Query: 244 GGTLFLDEIGEMDLVLQAKLLKLLEDRSIRRIGAVKERKVDLRVISATNCNLEQMVQQGK 303
           GGTLFLDEIG+  L LQ KLL+ ++D+   R+G    R+ D+R+++ATN NLE MV+ G+
Sbjct: 240 GGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGR 299

Query: 304 FRRDLFFRLRIIALKVPRLYSRGQDILLLARHFLAHHSRRYGKPNLRFSAEAESLLLGYS 363
           FR DL +RL +I L +P L  R +DIL LA  FLA   + Y +P   FS EA   LLGY 
Sbjct: 300 FREDLLYRLNVITLHLPPLRERAEDILTLADRFLARFVKEYARPARGFSDEAREALLGYR 359

Query: 364 WPGNVRELRNMLEQTVLLAPNEVVQAHQLNLCMTLVDEPLAQQPMAAMFEMPRHEPEPGT 423
           WPGN+RELRN++E+  ++ P E V+   L          +A+QP+        + P  G 
Sbjct: 360 WPGNIRELRNVVERASIICPQEKVEISHLG---------MAEQPV-------NNAPRIGA 403

Query: 424 --SLPDMERDLVCKTLDRTDWNVTKSARMLGLSRDMLRYRIEK 464
             SL ++E+  +   L   D  + ++A+ LG+    L YR  K
Sbjct: 404 ALSLDELEKAHIGAVLATAD-TLDQAAKTLGIDASTL-YRKRK 444