Pairwise Alignments

Query, 475 a.a., Sigma-54 dependent transcriptional regulator/response regulator from Pseudomonas putida KT2440

Subject, 449 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  280 bits (717), Expect = 5e-80
 Identities = 176/464 (37%), Positives = 255/464 (54%), Gaps = 30/464 (6%)

Query: 5   ILVVEDDEILADNIRTYLSLKGYEVIVCHSAELALEQIKRAQPDAVLTDNSLPGMSGHDL 64
           +L+VEDD  +       L L+   V    SAE A  ++ R  P  V++D  LPGM G  L
Sbjct: 9   VLLVEDDPDVRLGCEQALQLEDIPVSSVDSAEKARRRLTRDFPGIVVSDIRLPGMDGMAL 68

Query: 65  LRTLVAQAPDLKVIMMTGYGNVEDAVQAMKEGAFHYLTKPVVLAELKLTLDKALATERME 124
           L+ L A  P+L V+++TG+G+V  AVQAMK GA  ++ KP     L   + +AL   R+ 
Sbjct: 69  LKELQAIDPELPVVLITGHGDVSLAVQAMKGGAHDFIEKPFSPDYLVEVVRRALDKRRLT 128

Query: 125 RTLSFYQEREAQKSGLQA-LIGESPVMLTLKHTLRQVLDAERRMASDDLPPVLIEGETGT 183
             +   + R   +  L+A LIG SP M+ +    RQ++      A+D    +LI GETGT
Sbjct: 129 LEVRQLRARLESRDTLEARLIGRSPAMVKV----RQLVADLGNSAAD----ILIFGETGT 180

Query: 184 GKELVARALHFDGSRSKGPFIEFNCASIPANLLEAELFGHEKGAFTDAKERRVGLVEAAD 243
           GKEL AR LH  G R  G F+  NC  +P  L E+E+FGHE GA+T A ++R+G +E A 
Sbjct: 181 GKELAARCLHEAGPRRNGNFVAINCGGLPETLFESEIFGHEAGAYTGAAKKRIGKIEHAS 240

Query: 244 GGTLFLDEIGEMDLVLQAKLLKLLEDRSIRRIGAVKERKVDLRVISATNCNLEQMVQQGK 303
           GGTLFLDEI  M + +Q KLL++L++RS+ R+G+     VD RVI+AT  +L+++  QG+
Sbjct: 241 GGTLFLDEIESMPMAMQIKLLRVLQERSLERLGSNTPIPVDCRVIAATKADLKELSDQGR 300

Query: 304 FRRDLFFRLRIIALKVPRLYSRGQDILLLARHFLAHHSRRYGKPNLRFSAEAESLLLGYS 363
           FR DL++RL +  L +P L  R +DI LL  HFL   + R+ +P           LL Y 
Sbjct: 301 FRADLYYRLNVATLPLPPLRERREDIPLLFEHFLLQAAARHERPVPAADPARMGPLLAYD 360

Query: 364 WPGNVRELRNMLEQTVLLAPNEVVQAHQLNLCMTLVDEPLAQQPMAAMFEMPRHEPEPGT 423
           WPGNVRELRN+ ++ VL     V                    P  A  E P  +     
Sbjct: 361 WPGNVRELRNVADRCVLGIEAGVA-------------------PFTA--ESPTQKRSLAE 399

Query: 424 SLPDMERDLVCKTLDRTDWNVTKSARMLGLSRDMLRYRIEKLGL 467
           ++   ER L+ + L+R   ++ ++A  L +++  L  +I K GL
Sbjct: 400 TVDSFERALITEALERNQGSLARTAEDLRIAKTTLHDKIRKYGL 443