Pairwise Alignments
Query, 481 a.a., minor curlin subunit CsgB, nucleation component of curlin monomers from Pseudomonas putida KT2440
Subject, 354 a.a., Curlin associated repeat. from Pseudomonas stutzeri RCH2
Score = 103 bits (257), Expect = 9e-27
Identities = 104/357 (29%), Positives = 154/357 (43%), Gaps = 55/357 (15%)
Query: 138 SKATSGQSGQRNEAFIEQTFG---------GSNNRSTVNQTGQDNYATAEHLNHVDGDIQ 188
S+A + Q+G NEA +EQ G G + S V Q G N A L+ +D ++
Sbjct: 27 SQAITTQNGSDNEAILEQRGGWNLSNQLQQGEGHFSRVEQDGDRNSAQTSQLS-LDNHVE 85
Query: 189 VYQEGHDNWAYGDQREGT--GGTIAIGQYGGGNSVEVWQDTQIGSQASVVQTGQSNEGYI 246
V Q G N Q + G + +I Q G N E+ Q GSQA++ Q G N +
Sbjct: 86 VLQSGSANQVTVVQVSDSFYGHSASIVQLGAANVAELEQAEGNGSQATIHQQGSGNTHRV 145
Query: 247 DQ----------SFGVSNKVSLSQQGNANASWSDQFETNNSTTTITQTGNNNLHFTYQNG 296
+Q S G N ++Q G A+A+ + QF +NN T I Q Y G
Sbjct: 146 EQLYYASRVDSRSSGTDNLTEITQNGAASAT-TQQFGSNNRIT-IEQN-------VYPYG 196
Query: 297 ENLNLTINTQGNGNSITASNWKGAKMGGQFGTNQNATINQAGNGNGVNLTQKGADQLATL 356
+N + G N S + GG++ T A + Q G+ N + Q G T
Sbjct: 197 GGIN--VYQDGTSNEARVSQY-----GGRYDTGDVA-LRQVGSANDAQVVQWGGFSNLTF 248
Query: 357 TQTGKGNQMSTKQDDVSNELYFEQNGTDNILIADQRGTDNYAYGSSQGTGNTITLDQSGY 416
TQ G GN+++ +Q S + G DN + DQ G + + Q+G+
Sbjct: 249 TQDGVGNELTARQSTRSGTIRGSSVGNDNRVNIDQ-----------SFDGPVLDITQNGW 297
Query: 417 SNQSYTNQLYGSGNEATIKQTDSINVAYVTQGG----QSNKAFVDQSGVAQSATITQ 469
+N+ Q G G A+I Q N+A + Q +S A + Q+GV SA+ITQ
Sbjct: 298 ANEIDAVQHVGYGT-ASISQIGDRNIAVLNQVPGYPLESTSAAIIQNGVGNSASITQ 353
Score = 68.9 bits (167), Expect = 3e-16
Identities = 80/286 (27%), Positives = 120/286 (41%), Gaps = 51/286 (17%)
Query: 229 IGSQASVVQTGQSNEGYIDQSFG--VSNKVSLSQQGNANASWSDQFETNNSTTTITQTGN 286
+ SQA Q G NE ++Q G +SN++ QQG + S +Q NS T + +
Sbjct: 25 VTSQAITTQNGSDNEAILEQRGGWNLSNQL---QQGEGHFSRVEQDGDRNSAQTSQLSLD 81
Query: 287 NNLHFTYQNGEN----LNLTINTQGNGNSIT---ASNWKGAKMGGQFGTNQNATINQAGN 339
N++ N + ++ + G+ SI A+N A++ G ATI+Q G+
Sbjct: 82 NHVEVLQSGSANQVTVVQVSDSFYGHSASIVQLGAAN--VAELEQAEGNGSQATIHQQGS 139
Query: 340 GN-----------GVNLTQKGADQLATLTQTGKGNQMSTKQDDVSNELYFEQN-----GT 383
GN V+ G D L +TQ G + +T+Q +N + EQN G
Sbjct: 140 GNTHRVEQLYYASRVDSRSSGTDNLTEITQNGAAS-ATTQQFGSNNRITIEQNVYPYGGG 198
Query: 384 DNILIADQRGTDNYA----YGSSQGTGNTI-----------TLDQSGYSNQSYTNQLYGS 428
N+ Q GT N A YG TG+ + G+SN ++T G
Sbjct: 199 INVY---QDGTSNEARVSQYGGRYDTGDVALRQVGSANDAQVVQWGGFSNLTFTQD--GV 253
Query: 429 GNEATIKQTDSINVAYVTQGGQSNKAFVDQSGVAQSATITQLGSAN 474
GNE T +Q+ + G N+ +DQS ITQ G AN
Sbjct: 254 GNELTARQSTRSGTIRGSSVGNDNRVNIDQSFDGPVLDITQNGWAN 299
Score = 65.9 bits (159), Expect = 2e-15
Identities = 75/262 (28%), Positives = 112/262 (42%), Gaps = 39/262 (14%)
Query: 25 TSSQTQDGKENIAEVSQTQASFASATQNQTGMGHNHLAVQAESTSDIQQSATGQYNAGYA 84
++S Q G N+AE+ Q + + + AT +Q G G+ H Q S + ++G
Sbjct: 108 SASIVQLGAANVAELEQAEGNGSQATIHQQGSGNTHRVEQLYYASRVDSRSSGT------ 161
Query: 85 EQLFENGSQITQHAGGSYNDAFASQSLGSNNESLQTQQGV---GNKSTVWQD-------- 133
+N ++ITQ+ S +Q GSNN + +Q V G V+QD
Sbjct: 162 ----DNLTEITQNGAAS----ATTQQFGSNNR-ITIEQNVYPYGGGINVYQDGTSNEARV 212
Query: 134 SQEGSKATSG-----QSGQRNEAFIEQTFGGSNNRSTVNQTGQDNYATAEHLNHVDGDIQ 188
SQ G + +G Q G N+A + Q G SN T Q G N TA G I+
Sbjct: 213 SQYGGRYDTGDVALRQVGSANDAQVVQWGGFSN--LTFTQDGVGNELTARQSTR-SGTIR 269
Query: 189 VYQEGHDNWAYGDQREGTGGTIAIGQYGGGNSVEVWQDTQIGSQASVVQTGQSNEGYIDQ 248
G+DN DQ G + I Q G N ++ Q G+ AS+ Q G N ++Q
Sbjct: 270 GSSVGNDNRVNIDQ-SFDGPVLDITQNGWANEIDAVQHVGYGT-ASISQIGDRNIAVLNQ 327
Query: 249 SFGV---SNKVSLSQQGNANAS 267
G S ++ Q G N++
Sbjct: 328 VPGYPLESTSAAIIQNGVGNSA 349
Score = 59.3 bits (142), Expect = 2e-13
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 325 QFGTNQNATINQAGNGNGVNLTQKGADQLATLTQTGKGNQMSTKQDDVSNELYFEQNGTD 384
Q G++ A + Q G N N Q+G + + Q G N T Q + N + Q+G+
Sbjct: 33 QNGSDNEAILEQRGGWNLSNQLQQGEGHFSRVEQDGDRNSAQTSQLSLDNHVEVLQSGSA 92
Query: 385 NILIADQRGTDNYAYGSSQGTGNTITLDQSGYSNQSYTNQLYGSGNEATIKQTDSINVAY 444
N + Q Y G++ ++ Q G +N + Q G+G++ATI Q S N
Sbjct: 93 NQVTVVQVSDSFY--------GHSASIVQLGAANVAELEQAEGNGSQATIHQQGSGNTHR 144
Query: 445 VTQ-----------GGQSNKAFVDQSGVAQSATITQLGSANLATVTQ 480
V Q G N + Q+G A SAT Q GS N T+ Q
Sbjct: 145 VEQLYYASRVDSRSSGTDNLTEITQNGAA-SATTQQFGSNNRITIEQ 190
Score = 54.7 bits (130), Expect = 5e-12
Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 372 VSNELYFEQNGTDNILIADQRGTDNYAYGSSQGTGNTITLDQSGYSNQSYTNQLYGSGNE 431
V+++ QNG+DN I +QRG N + QG G+ ++Q G N + T+QL N
Sbjct: 25 VTSQAITTQNGSDNEAILEQRGGWNLSNQLQQGEGHFSRVEQDGDRNSAQTSQL-SLDNH 83
Query: 432 ATIKQTDSINVAYVTQGGQSNKAFVDQSGVAQSATITQLGSANLATVTQ 480
+ Q+ S N V Q V S SA+I QLG+AN+A + Q
Sbjct: 84 VEVLQSGSANQVTVVQ--------VSDSFYGHSASIVQLGAANVAELEQ 124